def __init__(self, parent):
self.start_iter = None
wx.Panel.__init__(self, parent, style=wx.SUNKEN_BORDER)
vbox = wx.BoxSizer(wx.VERTICAL)
title = wx.StaticText(self, label="RAAR Algorithm")
vbox.Add(title ,0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.exp_amps = TextPanelObject(self, "Exp Amp: ", "",100,"Numpy files (*.npy)|*.npy|All files (*.*)|*.*")
vbox.Add(self.exp_amps, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.chkbox_sqrt_expamps = wx.CheckBox(self, -1, 'Square Root Exp Amp', (50, 10))
self.chkbox_sqrt_expamps.SetValue(True)
vbox.Add(self.chkbox_sqrt_expamps, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.BOTTOM, border=5)
self.support = TextPanelObject(self,"Support: ","",100,"Numpy files (*.npy)|*.npy|All files (*.*)|*.*")
self.support.label.SetToolTipNew("Support. If empty, previous instance will be used.")
vbox.Add(self.support, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.mask = TextPanelObject(self,"Mask: ","",100,"Numpy files (*.npy)|*.npy|All files (*.*)|*.*")
vbox.Add(self.mask, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.beta = SpinnerObject(self,"Beta: ",1.0,0.0,0.01,0.9,100,100)
vbox.Add(self.beta, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.niter = SpinnerObject(self,"Iterations: ",MAX_INT,1,1,1,100,100)
vbox.Add(self.niter, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
vbox.Add((-1, 5))
self.chkbox = CheckBoxNew(self, -1, 'Relax Modulus Constraint', size=(200, 20))
self.chkbox.SetToolTipNew("Do not apply modulus constraint if the change in amplitude"+os.linesep+" is within the Poisson noise.")
self.chkbox.Bind(wx.EVT_CHECKBOX, self.OnCheck)
vbox.Add(self.chkbox, 0,flag=wx.EXPAND|wx.LEFT|wx.RIGHT, border=2)
self.niter_relax = SpinnerObject(self,"Relax iters: ",MAX_INT,0,1,0,100,100)
self.niter_relax.label.SetToolTipNew("Reduce the relaxtion to zero linearly over this many iterations.")
self.niter_relax.Disable()
vbox.Add(self.niter_relax, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.chkbox.Hide()
self.niter_relax.Hide()
vbox.Add((-1, 5))
self.SetAutoLayout(True)
self.SetSizer( vbox )
python类SUNKEN_BORDER的实例源码
def __init__(self, parent):
self.start_iter = None
wx.Panel.__init__(self, parent, style=wx.SUNKEN_BORDER)
vbox = wx.BoxSizer(wx.VERTICAL)
title = wx.StaticText(self, label="HIO Algorithm")
vbox.Add(title ,0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.exp_amps = TextPanelObject(self, "Exp Amp: ", "",100,"Numpy files (*.npy)|*.npy|All files (*.*)|*.*")
vbox.Add(self.exp_amps, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.chkbox_sqrt_expamps = wx.CheckBox(self, -1, 'Square Root Exp Amp', (50, 10))
self.chkbox_sqrt_expamps.SetValue(True)
vbox.Add(self.chkbox_sqrt_expamps, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.BOTTOM, border=5)
self.support = TextPanelObject(self,"Support: ","",100,"Numpy files (*.npy)|*.npy|All files (*.*)|*.*")
self.support.label.SetToolTipNew("Support. If empty, previous instance will be used.")
vbox.Add(self.support, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.mask = TextPanelObject(self,"Mask: ","",100,"Numpy files (*.npy)|*.npy|All files (*.*)|*.*")
vbox.Add(self.mask, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.beta = SpinnerObject(self,"Beta: ",1.0,0.0,0.01,0.9,100,100)
vbox.Add(self.beta, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.niter = SpinnerObject(self,"Iterations: ",MAX_INT,1,1,1,100,100)
vbox.Add(self.niter, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
vbox.Add((-1, 5))
self.chkbox = CheckBoxNew(self, -1, 'Relax Modulus Constraint', size=(200, 20))
self.chkbox.SetToolTipNew("Do not apply modulus constraint if the change in amplitude"+os.linesep+" is within the Poisson noise.")
self.chkbox.Bind(wx.EVT_CHECKBOX, self.OnCheck)
vbox.Add(self.chkbox, 0,flag=wx.EXPAND|wx.LEFT|wx.RIGHT, border=2)
self.niter_relax = SpinnerObject(self,"Relax iters: ",MAX_INT,0,1,0,100,100)
self.niter_relax.label.SetToolTipNew("Reduce the relaxtion to zero linearly over this many iterations.")
self.niter_relax.Disable()
vbox.Add(self.niter_relax, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.chkbox.Hide()
self.niter_relax.Hide()
vbox.Add((-1, 5))
self.SetAutoLayout(True)
self.SetSizer( vbox )
def __init__(self, parent):
from math import pi
self.start_iter = None
wx.Panel.__init__(self, parent, style=wx.SUNKEN_BORDER)
vbox = wx.BoxSizer(wx.VERTICAL)
title = wx.StaticText(self, label="Phase Constrained HIO Algorithm")
vbox.Add(title ,0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.exp_amps = TextPanelObject(self, "Exp Amp: ", "",100,"Numpy files (*.npy)|*.npy|All files (*.*)|*.*")
vbox.Add(self.exp_amps, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.chkbox_sqrt_expamps = wx.CheckBox(self, -1, 'Square Root Exp Amp', (50, 10))
self.chkbox_sqrt_expamps.SetValue(True)
vbox.Add(self.chkbox_sqrt_expamps, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.BOTTOM, border=5)
self.support = TextPanelObject(self,"Support: ","",100,"Numpy files (*.npy)|*.npy|All files (*.*)|*.*")
self.support.label.SetToolTipNew("Support. If empty, previous instance will be used.")
vbox.Add(self.support, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.mask = TextPanelObject(self,"Mask: ","",100,"Numpy files (*.npy)|*.npy|All files (*.*)|*.*")
vbox.Add(self.mask, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.beta = SpinnerObject(self,"Beta: ",1.0,0.0,0.01,0.9,100,100)
vbox.Add(self.beta, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.niter = SpinnerObject(self,"Iterations: ",MAX_INT,1,1,1,100,100)
vbox.Add(self.niter, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.phasemax = SpinnerObject(self,"Phase Max: ",pi,0.0,0.01,pi,100,150)
vbox.Add(self.phasemax, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.phasemin = SpinnerObject(self,"Phase Min: ",0.0,-pi,0.01,-pi,100,150)
vbox.Add(self.phasemin, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.SetAutoLayout(True)
self.SetSizer( vbox )
def __init__(self, parent):
self.start_iter = None
wx.Panel.__init__(self, parent, style=wx.SUNKEN_BORDER)
vbox = wx.BoxSizer(wx.VERTICAL)
title = StaticTextNew(self, label="Save sequence data to Numpy array")
title.SetToolTipNew("Save sequence to Numpy array. "+os.linesep+"No co-ordinate transformation is performed.")
vbox.Add(title ,0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.output_filename = TextPanelObject(self, "Output File: ", "output.npy",150,'*.npy')
vbox.Add(self.output_filename, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.SetAutoLayout(True)
self.SetSizer( vbox )
def __init__(self, parent):
self.start_iter = None
wx.Panel.__init__(self, parent, style=wx.SUNKEN_BORDER)
vbox = wx.BoxSizer(wx.VERTICAL)
title = StaticTextNew(self, label="Save residual data")
title.SetToolTipNew("Save residual error data to file (ascii format).")
vbox.Add(title ,0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.output_filename = TextPanelObject(self, "Output File: ", "output_residual.csv",150,'*.csv')
vbox.Add(self.output_filename, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.SetAutoLayout(True)
self.SetSizer( vbox )
def __init__(self, parent):
self.start_iter = None
wx.Panel.__init__(self, parent, style=wx.SUNKEN_BORDER)
vbox = wx.BoxSizer(wx.VERTICAL)
title = StaticTextNew(self, label="Save Coordinates to Numpy array")
title.SetToolTipNew("Save coordinates to Numpy array. "+os.linesep+"A prior co-ordinate transformation\nshould have occured.")
vbox.Add(title ,0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.output_filename = TextPanelObject(self, "Output File: ", "output_coordinates.npy",150,'*.npy')
vbox.Add(self.output_filename, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.SetAutoLayout(True)
self.SetSizer( vbox )
def __init__(self, parent):
wx.Panel.__init__(self, parent, style=wx.SUNKEN_BORDER)
vbox = wx.BoxSizer(wx.VERTICAL)
title = StaticTextNew(self, label=" Interpolate array with coordinates onto a regular grid Numpy array")
title.SetToolTipNew("")
vbox.Add(title ,0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.input_filename = TextPanelObject(self, "Input file: ", "output.npy",100,"Numpy files (*.npy)|*.npy|All files (*.*)|*.*")
vbox.Add(self.input_filename, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.coords_filename = TextPanelObject(self, "Input Co-ord's: ", "coordinates.npy",100,"Numpy files (*.npy)|*.npy|All files (*.*)|*.*")
vbox.Add(self.coords_filename, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.output_filename = TextPanelObject(self, "Output file: ", "output_interpolated.npy",100,"Numpy files (*.npy)|*.npy|All files (*.*)|*.*")
vbox.Add(self.output_filename, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
vbox.Add((-1, 10))
title2 = StaticTextNew(self, label=" Array grid size (i,j,k): ")
title2.SetToolTipNew("Grid Size")
vbox.Add(title2 ,0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.spacer=[{} for i in range(3)]
self.spacer[0] = SpinnerObject(self,"i",MAX_INT_16,1,1,100,20,100)
self.spacer[1] = SpinnerObject(self,"j",MAX_INT_16,1,1,100,20,100)
self.spacer[2] = SpinnerObject(self,"k",MAX_INT_16,1,1,100,20,100)
hbox = wx.BoxSizer(wx.HORIZONTAL)
hbox.Add(self.spacer[0], 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.BOTTOM, border=2)
hbox.Add(self.spacer[1], 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.BOTTOM, border=2)
hbox.Add(self.spacer[2], 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.BOTTOM, border=2)
vbox.Add(hbox, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
vbox.Add((-1, 10))
self.interp_range = SpinnerObject(self,"Interpolation Range:",1.0,0.0,0.001,0.001,180,100)
self.interp_range.label.SetToolTipNew(" Specify influence distance of each input point. This distance is "+os.linesep+" a fraction of the length of the diagonal of the sample space. "+os.linesep+" Thus, values of 1.0 will cause each input point to influence "+os.linesep+" all points in the structured point dataset. Values less than 1.0 "+os.linesep+" can improve performance significantly.")
vbox.Add(self.interp_range, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.SetAutoLayout(True)
self.SetSizer( vbox )
def MakeRange(self, i, inc=1.0):
if len(self.parent.datarangelist) < (i+1):
min = self.scalebar_ranges[i][0]
max = self.scalebar_ranges[i][1]
self.parent.datarangelist.append( [min, max] )
current_min = min
current_max = max
else:
min = self.parent.datarangelist[i][0]
max = self.parent.datarangelist[i][1]
current_min = self.scalebar_ranges[i][0]
current_max = self.scalebar_ranges[i][1]
label= "Range %d"%((i+1))
range = abs(max - min)
if range > MAX_INT:
newinc = range/MAX_INT
else:
newinc = inc
self.sbox.append( wx.StaticBox(self, label=label, style=wx.SUNKEN_BORDER) )
self.sboxs.append( wx.StaticBoxSizer(self.sbox[-1],wx.VERTICAL) )
self.shbox.append( wx.BoxSizer(wx.HORIZONTAL) )
self.valuemax.append( SpinnerObject(self,"Max:",max,min,newinc,current_max,50,150) )
self.shbox[-1].Add(self.valuemax[-1], 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.shbox[-1].Add((5, -1))
self.valuemin.append( SpinnerObject(self,"Min:",max,min,newinc,current_min,50,150) )
self.shbox[-1].Add(self.valuemin[-1], 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.sboxs[-1].Add(self.shbox[-1], 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.vbox.Add(self.sboxs[-1], 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
def __init__(self, parent, name, library, default=None):
wx.Dialog.__init__(self,
name='BrowseValueDialog', parent=parent,
style=wx.DEFAULT_DIALOG_STYLE | wx.RESIZE_BORDER,
title=_('Browse %s values library') % name)
self.staticText1 = wx.StaticText(
label=_('Choose a value for %s:') % name, name='staticText1', parent=self,
pos=wx.Point(0, 0), size=wx.DefaultSize, style=0)
self.ValuesLibrary = wx.TreeCtrl(
name='ValuesLibrary', parent=self, pos=wx.Point(0, 0),
size=wx.Size(400, 200), style=wx.TR_HAS_BUTTONS | wx.TR_SINGLE | wx.SUNKEN_BORDER | wx.TR_HIDE_ROOT | wx.TR_LINES_AT_ROOT)
self.ButtonSizer = self.CreateButtonSizer(wx.OK | wx.CANCEL | wx.CENTRE)
self.Bind(wx.EVT_BUTTON, self.OnOK, id=self.ButtonSizer.GetAffirmativeButton().GetId())
self.flexGridSizer1 = wx.FlexGridSizer(cols=1, hgap=0, rows=3, vgap=10)
self.flexGridSizer1.AddWindow(self.staticText1, 0, border=20, flag=wx.GROW | wx.TOP | wx.LEFT | wx.RIGHT)
self.flexGridSizer1.AddWindow(self.ValuesLibrary, 0, border=20, flag=wx.GROW | wx.LEFT | wx.RIGHT)
self.flexGridSizer1.AddSizer(self.ButtonSizer, 0, border=20, flag=wx.ALIGN_RIGHT | wx.BOTTOM | wx.LEFT | wx.RIGHT)
self.flexGridSizer1.AddGrowableCol(0)
self.flexGridSizer1.AddGrowableRow(1)
self.SetSizer(self.flexGridSizer1)
self.Fit()
root = self.ValuesLibrary.AddRoot("")
self.GenerateValuesLibraryBranch(root, library, default)
def __init__(self, parent):
wx.ListCtrl.__init__(self, parent, -1, style=wx.LC_REPORT | wx.SUNKEN_BORDER)
CheckListCtrlMixin.__init__(self)
ListCtrlAutoWidthMixin.__init__(self)
#wx.ListCtrl.InsertStringItem(
#
def __init__(self, parent):
"""Constructor"""
wx.Panel.__init__(self, parent, -1, style=wx.WANTS_CHARS)
# self.Bind(wx.EVT_BUTTON, self.OnSelectFont, btn)
self.list_ctrl = theListCtrl(self, -1, style=wx.LC_REPORT | wx.LC_HRULES | wx.LC_VRULES | wx.SUNKEN_BORDER)
st1 = wx.StaticText(self, label=' Cadena Busqueda')
self.cadenaBusqueda = wx.TextCtrl(self)
btnbusqueda = wx.Button(self, label="Buscar")
btnrecargaVM = wx.Button(self, label="Actualizar VM")
name_rows = ['Carpeta', 'Nombre', 'IP', 'Estado', 'pregunta', 'Disco Path', 'Sistema', 'Notas', 'uuid']
# cargamos los nombres de los elementos
for x in range(len(name_rows)):
self.list_ctrl.InsertColumn(x, name_rows[x])
# conexion = conectar_con_vcenter(self, id)
self.tabla = []
self.tabla = sacar_listado_capertas(conexion)
self.vm_buscados = []
self.cargardatos_en_listctrl(self.tabla)
# para la ordenacion--- llama a Getlistctrl
self.itemDataMap = self.tabla
listmix.ColumnSorterMixin.__init__(self, len(name_rows))
self.list_ctrl.Bind(wx.EVT_LIST_ITEM_SELECTED, self.onItemSelected, self.list_ctrl)
# self.list_ctrl.Bind(wx.EVT_CONTEXT_MENU, self.onItemSelected, self.list_ctrl)
# Metemos las cosas en le ventana en orden
txtcontador = wx.StaticText(self, label='total VM: ' + str(len(self.tabla)))
sizer = wx.BoxSizer(wx.VERTICAL)
hbox1 = wx.BoxSizer(wx.HORIZONTAL)
hbox1.Add(st1, wx.ALL | wx.ALIGN_CENTER, 5)
hbox1.Add(self.cadenaBusqueda, wx.ALL | wx.ALIGN_CENTER, 5)
hbox1.Add(btnbusqueda, 0, wx.ALL | wx.ALIGN_RIGHT | wx.ALIGN_CENTER, 5)
hbox1.Add(btnrecargaVM, 0, wx.ALL | wx.ALIGN_RIGHT | wx.ALIGN_CENTER, 5)
hbox1.Add(txtcontador, wx.ALL | wx.ALIGN_CENTER, 5)
sizer.Add(hbox1, flag=wx.EXPAND | wx.LEFT | wx.RIGHT | wx.TOP | wx.ALIGN_CENTER, border=2)
self.Bind(wx.EVT_BUTTON, self.busquedadatos, btnbusqueda)
self.Bind(wx.EVT_BUTTON, self.recarga_VM, btnrecargaVM)
sizer.Add(self.list_ctrl, 1, wx.ALL | wx.EXPAND, 5)
self.SetSizer(sizer)
# tools for search an debug (to use uncomment the next line, works only linux)
# wx.lib.inspection.InspectionTool().Show()
# ----------------------------------------------------------------------
# Used by the ColumnSorterMixin, see wx/lib/mixins/listctrl.py
def __init__(self, parent):
wx.Panel.__init__(self, parent, style=wx.SUNKEN_BORDER)
self.panelphase = self.GetParent().GetParent().GetParent()
self.font = self.GetParent().font
self.file = None
vbox = wx.BoxSizer(wx.VERTICAL)
title = wx.StaticText(self, label="Fill blank voxels lines in raw data.")
vbox.Add(title ,0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.input_filename = TextPanelObject(self, "Input File: ", "",150,"Numpy files (*.npy)|*.npy|All files (*.*)|*.*")
vbox.Add(self.input_filename, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
hbox = wx.BoxSizer(wx.HORIZONTAL)
label = wx.StaticText(self, -1,"ROI:" , style =wx.ALIGN_RIGHT, size=(150,-1) )
label.SetFont(self.font)
hbox.Add( label, 0, wx.CENTER )
def OnEdit(event):
self.objectpath.ChangeValue(event.GetString())
self.objectpath = TextCtrlNew(self, -1)
self.objectpath.SetFont(self.font)
self.objectpath.SetValue("")
self.objectpath.SetToolTipNew("Region of Interest")
self.objectpath.Bind(wx.EVT_TEXT_ENTER, OnEdit)
hbox.Add( self.objectpath, 1, wx.CENTER |wx.EXPAND )
self.button = ButtonNew(self, -1, "Browse")
self.button.SetFont(self.font)
self.button.SetToolTipNew("Browse for ROI.")
self.button.Bind(wx.EVT_BUTTON, self.OnBrowse)
hbox.Add( self.button, 0, wx.LEFT|wx.CENTER)
vbox.Add(hbox, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.output_filename = TextPanelObject(self, "Output File: ", "output.npy",150,'*.npy')
vbox.Add(self.output_filename, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
vbox.Add((0,10))
title2 = wx.StaticText(self, label="Filter kernel dimensions: ")
vbox.Add(title2 ,0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.kdims=[{} for i in range(3)]
self.kdims[0] = SpinnerObject(self,"x",MAX_INT_16,1,1,3,20,60)
self.kdims[1] = SpinnerObject(self,"y",MAX_INT_16,1,1,3,20,60)
self.kdims[2] = SpinnerObject(self,"z",MAX_INT_16,1,1,1,20,60)
hbox1 = wx.BoxSizer(wx.HORIZONTAL)
hbox1.Add(self.kdims[0], 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.BOTTOM, border=10)
hbox1.Add(self.kdims[1], 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.BOTTOM, border=10)
hbox1.Add(self.kdims[2], 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.BOTTOM, border=10)
vbox.Add(hbox1, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.SetAutoLayout(True)
self.SetSizer( vbox )
def __init__(self, parent):
wx.Panel.__init__(self, parent, style=wx.SUNKEN_BORDER)
vbox = wx.BoxSizer(wx.VERTICAL)
title = StaticTextNew(self, label="Crop and Pad Numpy Array")
title.SetToolTipNew("Input array will be cropped and then "+os.linesep+"padded according to the values below.")
vbox.Add(title ,0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.input_filename = TextPanelObject(self, "Input File: ", "",150,"Numpy files (*.npy)|*.npy|All files (*.*)|*.*")
vbox.Add(self.input_filename, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.output_filename = TextPanelObject(self, "Output File: ", "",150,"Numpy files (*.npy)|*.npy|All files (*.*)|*.*")
vbox.Add(self.output_filename, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
title2 = wx.StaticText(self, label="Crop dimensions: Start: ")
vbox.Add(title2 ,0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.csdims=[{} for i in range(3)]
self.csdims[0] = SpinnerObject(self,"i",MAX_INT_16,0,1,0,20,60)
self.csdims[1] = SpinnerObject(self,"j",MAX_INT_16,0,1,0,20,60)
self.csdims[2] = SpinnerObject(self,"k",MAX_INT_16,0,1,0,20,60)
hbox = wx.BoxSizer(wx.HORIZONTAL)
hbox.Add(self.csdims[0], 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.BOTTOM, border=10)
hbox.Add(self.csdims[1], 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.BOTTOM, border=10)
hbox.Add(self.csdims[2], 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.BOTTOM, border=10)
vbox.Add(hbox, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
title3 = wx.StaticText(self, label="Crop dimensions: End: ")
vbox.Add(title3 ,0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.cedims=[{} for i in range(3)]
self.cedims[0] = SpinnerObject(self,"i",MAX_INT_16,0,1,0,20,60)
self.cedims[1] = SpinnerObject(self,"j",MAX_INT_16,0,1,0,20,60)
self.cedims[2] = SpinnerObject(self,"k",MAX_INT_16,0,1,0,20,60)
hbox1 = wx.BoxSizer(wx.HORIZONTAL)
hbox1.Add(self.cedims[0], 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.BOTTOM, border=10)
hbox1.Add(self.cedims[1], 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.BOTTOM, border=10)
hbox1.Add(self.cedims[2], 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.BOTTOM, border=10)
vbox.Add(hbox1, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
title4 = wx.StaticText(self, label="Pad dimensions: Start: ")
vbox.Add(title4 ,0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.psdims=[{} for i in range(3)]
self.psdims[0] = SpinnerObject(self,"i",MAX_INT_16,0,1,0,20,60)
self.psdims[1] = SpinnerObject(self,"j",MAX_INT_16,0,1,0,20,60)
self.psdims[2] = SpinnerObject(self,"k",MAX_INT_16,0,1,0,20,60)
hbox2 = wx.BoxSizer(wx.HORIZONTAL)
hbox2.Add(self.psdims[0], 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.BOTTOM, border=10)
hbox2.Add(self.psdims[1], 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.BOTTOM, border=10)
hbox2.Add(self.psdims[2], 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.BOTTOM, border=10)
vbox.Add(hbox2, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
title5 = wx.StaticText(self, label="Pad dimensions: End: ")
vbox.Add(title5 ,0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.pedims=[{} for i in range(3)]
self.pedims[0] = SpinnerObject(self,"i",MAX_INT_16,0,1,0,20,60)
self.pedims[1] = SpinnerObject(self,"j",MAX_INT_16,0,1,0,20,60)
self.pedims[2] = SpinnerObject(self,"k",MAX_INT_16,0,1,0,20,60)
hbox3 = wx.BoxSizer(wx.HORIZONTAL)
hbox3.Add(self.pedims[0], 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.BOTTOM, border=10)
hbox3.Add(self.pedims[1], 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.BOTTOM, border=10)
hbox3.Add(self.pedims[2], 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.BOTTOM, border=10)
vbox.Add(hbox3, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.SetAutoLayout(True)
self.SetSizer( vbox )
def __init__(self, parent):
wx.Panel.__init__(self, parent, style=wx.SUNKEN_BORDER)
vbox = wx.BoxSizer(wx.VERTICAL)
title = StaticTextNew(self, label="Replace Voxels in Numpy Array")
title.SetToolTipNew("Useful for viewing data with a cut-out section.")
vbox.Add(title ,0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.input_filename = TextPanelObject(self, "Input File: ", "",150,"Numpy files (*.npy)|*.npy|All files (*.*)|*.*")
vbox.Add(self.input_filename, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.output_filename = TextPanelObject(self, "Output File: ", "",150,"Numpy files (*.npy)|*.npy|All files (*.*)|*.*")
vbox.Add(self.output_filename, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
title2 = wx.StaticText(self, label="Start dimensions:")
vbox.Add(title2 ,0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.sdims=[{} for i in range(3)]
self.sdims[0] = SpinnerObject(self,"i",MAX_INT_16,0,1,0,20,60)
self.sdims[1] = SpinnerObject(self,"j",MAX_INT_16,0,1,0,20,60)
self.sdims[2] = SpinnerObject(self,"k",MAX_INT_16,0,1,0,20,60)
hbox = wx.BoxSizer(wx.HORIZONTAL)
hbox.Add(self.sdims[0], 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.BOTTOM, border=10)
hbox.Add(self.sdims[1], 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.BOTTOM, border=10)
hbox.Add(self.sdims[2], 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.BOTTOM, border=10)
vbox.Add(hbox, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
title3 = wx.StaticText(self, label="End dimensions:")
vbox.Add(title3 ,0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.edims=[{} for i in range(3)]
self.edims[0] = SpinnerObject(self,"i",MAX_INT_16,0,1,0,20,60)
self.edims[1] = SpinnerObject(self,"j",MAX_INT_16,0,1,0,20,60)
self.edims[2] = SpinnerObject(self,"k",MAX_INT_16,0,1,0,20,60)
hbox1 = wx.BoxSizer(wx.HORIZONTAL)
hbox1.Add(self.edims[0], 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.BOTTOM, border=10)
hbox1.Add(self.edims[1], 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.BOTTOM, border=10)
hbox1.Add(self.edims[2], 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.BOTTOM, border=10)
vbox.Add(hbox1, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
sbox1 = wx.StaticBox(self, label="Complex Value", style=wx.SUNKEN_BORDER)
sboxs1 = wx.StaticBoxSizer(sbox1,wx.VERTICAL)
hbox2 = wx.BoxSizer(wx.HORIZONTAL)
self.real = SpinnerObject(self,"Real:",MAX_INT_16,MIN_INT_16,0.1,1.0,50,150)
hbox2.Add(self.real, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
hbox2.Add((5, -1))
self.imag = SpinnerObject(self,"Imag:",MAX_INT_16,MIN_INT_16,0.1,0.0,50,150)
hbox2.Add(self.imag, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
sboxs1.Add(hbox2, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
vbox.Add(sboxs1, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.SetAutoLayout(True)
self.SetSizer( vbox )
def __init__(self,parent,ancestor):
from math import pi
self.ancestor = ancestor
wx.ScrolledWindow.__init__(self, parent, style=wx.SUNKEN_BORDER)
vbox = wx.BoxSizer(wx.VERTICAL)
title = wx.StaticText(self, label="View Support array")
vbox.Add(title ,0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.support = TextPanelObject(self, "Support: ", "",100,'*.npy')
vbox.Add(self.support, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.input_filename = TextPanelObject(self, "Data array: ", "",100,'*.npy')
vbox.Add(self.input_filename, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
vbox.Add((-1, 5))
self.sbox1 = wx.StaticBox(self, label="Isosurface", style=wx.BORDER_DEFAULT)
self.sboxs1 = wx.StaticBoxSizer(self.sbox1,wx.VERTICAL)
self.hbox1 = wx.BoxSizer(wx.HORIZONTAL)
self.contour_support = SpinnerObject(self,"Support:",1.0,0.0,0.1,0.5,100,100)
self.hbox1.Add(self.contour_support,0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.hbox1.Add((20, -1))
self.opacity = SpinnerObject(self,"Opacity:",1.0,0.0,0.1,0.5,130,100)
self.hbox1.Add(self.opacity,0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.sboxs1.Add(self.hbox1,0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.hbox2 = wx.BoxSizer(wx.HORIZONTAL)
self.contour = SpinnerObject(self,"Data:",MAX_INT,MIN_INT,1,100,100,100)
self.hbox2.Add(self.contour,0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.hbox2.Add((20, -1))
self.feature_angle = SpinnerObject(self,"Feature Angle:",180,0,1,90,130,100)
self.hbox2.Add(self.feature_angle,0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.sboxs1.Add(self.hbox2,0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.sboxs1.Add((-1, 5))
vbox.Add(self.sboxs1,0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
vbox.Add((-1, 5))
self.hbox6 = wx.BoxSizer(wx.HORIZONTAL)
self.chkbox_axes = wx.CheckBox(self, -1, 'View axes', size=(200, 20))
self.chkbox_axes.SetValue(False)
self.hbox6.Add(self.chkbox_axes, 1,flag=wx.EXPAND|wx.LEFT|wx.RIGHT, border=2)
self.hbox6.Add((-1, 5))
self.axes_fontfactor = SpinnerObject(self,"Font Factor:",MAX_INT,1,1,2,100,100)
self.hbox6.Add(self.axes_fontfactor, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT, border=2)
vbox.Add(self.hbox6, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP|wx.BOTTOM, border=2)
vbox.Add((-1, 5))
button_view = wx.Button(self, label="View", size=(70, 30))
button_view.Bind(wx.EVT_BUTTON, self.SeqParser )
vbox.Add(button_view,0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.SetAutoLayout(True)
self.SetSizer( vbox )
self.FitInside()
self.SetScrollRate(5, 5)
def __init__(self, parent):
from math import pi
self.start_iter = None
self.parent = parent
wx.Panel.__init__(self, parent, style=wx.SUNKEN_BORDER)
vbox = wx.BoxSizer(wx.VERTICAL)
title = StaticTextNew(self, label="Phase Gradient Constrained HIO Algorithm")
title.SetToolTipNew("Phase is constrained in the direction "+os.linesep+"of the Q-vector.")
vbox.Add(title ,0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.exp_amps = TextPanelObject(self, "Exp Amp: ", "",100,"Numpy files (*.npy)|*.npy|All files (*.*)|*.*")
vbox.Add(self.exp_amps, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.chkbox_sqrt_expamps = wx.CheckBox(self, -1, 'Square Root Exp Amp', (50, 10))
self.chkbox_sqrt_expamps.SetValue(True)
vbox.Add(self.chkbox_sqrt_expamps, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.BOTTOM, border=5)
self.support = TextPanelObject(self,"Support: ","",100,"Numpy files (*.npy)|*.npy|All files (*.*)|*.*")
self.support.label.SetToolTipNew("Support. If empty, previous instance will be used.")
vbox.Add(self.support, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.mask = TextPanelObject(self,"Mask: ","",100,"Numpy files (*.npy)|*.npy|All files (*.*)|*.*")
vbox.Add(self.mask, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.beta = SpinnerObject(self,"Beta: ",1.0,0.0,0.01,0.9,100,100)
vbox.Add(self.beta, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.niter = SpinnerObject(self,"Iterations: ",MAX_INT,1,1,1,100,100)
vbox.Add(self.niter, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.phasemax = SpinnerObject(self,"Phase Max: ",2.0*pi,0.0,0.01,pi,100,150)
vbox.Add(self.phasemax, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.phasemin = SpinnerObject(self,"Phase Min: ",2.0*pi,0.0,0.01,0.0,100,150)
vbox.Add(self.phasemin, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.qx = NumberObject(self,"Q,x:",0.0,80)
self.qx.label.SetToolTipNew("Q vector, x component direction.")
vbox.Add(self.qx ,0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.qy = NumberObject(self,"Q,y:",0.0,80)
self.qy.label.SetToolTipNew("Q vector, y component direction.")
vbox.Add(self.qy ,0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.qz = NumberObject(self,"Q,z:",0.0,80)
self.qz.label.SetToolTipNew("Q vector, z component direction.")
vbox.Add(self.qz ,0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.ttheta = 0.0
self.phi = 0.0
self.waveln = 0.0
vbox.Add((-1,20))
self.buttonq = wx.Button(self, label="Calculate Q", size=(100, 30))
vbox.Add(self.buttonq, flag=wx.EXPAND|wx.LEFT|wx.RIGHT, border=20)
self.Bind(wx.EVT_BUTTON, self.OnCalcQ, self.buttonq)
self.SetAutoLayout(True)
self.SetSizer( vbox )
def __init__(self, parent):
self.start_iter = None
wx.Panel.__init__(self, parent, style=wx.SUNKEN_BORDER)
vbox = wx.BoxSizer(wx.VERTICAL)
title = wx.StaticText(self, label="HIO Algorithm with Partial Coherence Optimisation")
vbox.Add(title ,0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.exp_amps = TextPanelObject(self, "Exp Amp: ", "",100,"Numpy files (*.npy)|*.npy|All files (*.*)|*.*")
vbox.Add(self.exp_amps, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.chkbox_sqrt_expamps = wx.CheckBox(self, -1, 'Square Root Exp Amp', (50, 10))
self.chkbox_sqrt_expamps.SetValue(True)
vbox.Add(self.chkbox_sqrt_expamps, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.BOTTOM, border=5)
self.support = TextPanelObject(self,"Support: ","",100,"Numpy files (*.npy)|*.npy|All files (*.*)|*.*")
self.support.label.SetToolTipNew("Support. If empty, previous instance will be used.")
vbox.Add(self.support, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.mask = TextPanelObject(self,"Mask: ","",100,"Numpy files (*.npy)|*.npy|All files (*.*)|*.*")
vbox.Add(self.mask, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.beta = SpinnerObject(self,"Beta: ",1.0,0.0,0.01,0.9,100,100)
vbox.Add(self.beta, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.niter = SpinnerObject(self,"Iterations: ",MAX_INT,1,1,1,100,100)
vbox.Add(self.niter, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
vbox.Add((1,5))
self.niterrlpre = SpinnerObject(self,"Iterations preceding R-L optimisation:", MAX_INT,1,1,100,300,100)
self.niterrlpre.label.SetToolTipNew("Number of HIO iterations performed before R-L Optimisation occurs.")
vbox.Add(self.niterrlpre, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.niterrl = SpinnerObject(self,"R-L iterations: ",MAX_INT,1,1,10,300,100)
self.niterrl.label.SetToolTipNew("Number of Richardon-Lucy iterations.")
vbox.Add(self.niterrl, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.niterrlinterval = SpinnerObject(self,"Interval between R-L optimisation: ",MAX_INT,1,1,50,300,100)
self.niterrlinterval.label.SetToolTipNew("")
vbox.Add(self.niterrlinterval, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.accel = SpinnerObject(self,"Acceleration: ",MAX_INT_16,1,1,1,100,100)
vbox.Add(self.accel, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
vbox.Add((1,5))
self.gammaHWHM = SpinnerObject(self,"Initial PSF HWHM: ",MAX_INT_16,0.0,0.01,0.2,300,100)
self.gammaHWHM.label.SetToolTipNew("HWHM of initial FT'd Lorentzian PSF.")
vbox.Add(self.gammaHWHM, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
title1 = wx.StaticText(self, label="Zero fill end dimensions of PSF:")
vbox.Add(title1 ,0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.zedims=[{} for i in range(3)]
self.zedims[0] = SpinnerObject(self,"i",MAX_INT_16,0,1,9,20,60)
self.zedims[1] = SpinnerObject(self,"j",MAX_INT_16,0,1,9,20,60)
self.zedims[2] = SpinnerObject(self,"k",MAX_INT_16,0,1,9,20,60)
hbox1 = wx.BoxSizer(wx.HORIZONTAL)
hbox1.Add(self.zedims[0], 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.BOTTOM, border=10)
hbox1.Add(self.zedims[1], 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.BOTTOM, border=10)
hbox1.Add(self.zedims[2], 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.BOTTOM, border=10)
vbox.Add(hbox1, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
vbox.Add((1,5))
self.chkbox_reset_gamma = wx.CheckBox(self, -1, 'Reset PSF before the next R-L optimisation cycle.', (50, 10))
self.chkbox_reset_gamma.SetValue(False)
vbox.Add(self.chkbox_reset_gamma, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.BOTTOM, border=5)
self.SetAutoLayout(True)
self.SetSizer( vbox )
def __init__(self, parent):
self.start_iter = None
wx.Panel.__init__(self, parent, style=wx.SUNKEN_BORDER)
vbox = wx.BoxSizer(wx.VERTICAL)
title = wx.StaticText(self, label="ER Mask Algorithm with Partial Coherence Optimisation")
vbox.Add(title ,0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.exp_amps = TextPanelObject(self, "Exp Amp: ", "",100,"Numpy files (*.npy)|*.npy|All files (*.*)|*.*")
vbox.Add(self.exp_amps, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.chkbox_sqrt_expamps = wx.CheckBox(self, -1, 'Square Root Exp Amp', (50, 10))
self.chkbox_sqrt_expamps.SetValue(True)
vbox.Add(self.chkbox_sqrt_expamps, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.BOTTOM, border=5)
self.support = TextPanelObject(self,"Support: ","",100,"Numpy files (*.npy)|*.npy|All files (*.*)|*.*")
self.support.label.SetToolTipNew("Support. If empty, previous instance will be used.")
vbox.Add(self.support, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.mask = TextPanelObject(self,"Mask: ","",100,"Numpy files (*.npy)|*.npy|All files (*.*)|*.*")
vbox.Add(self.mask, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.niter = SpinnerObject(self,"Iterations: ",MAX_INT,1,1,1,100,100)
vbox.Add(self.niter, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
vbox.Add((1,5))
self.niterrlpre = SpinnerObject(self,"Iterations preceding R-L optimisation:", MAX_INT,1,1,100,300,100)
self.niterrlpre.label.SetToolTipNew("Number of ER iterations performed before R-L Optimisation occurs.")
vbox.Add(self.niterrlpre, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.niterrl = SpinnerObject(self,"R-L iterations: ",MAX_INT,1,1,10,300,100)
self.niterrl.label.SetToolTipNew("Number of Richardon-Lucy iterations.")
vbox.Add(self.niterrl, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.niterrlinterval = SpinnerObject(self,"Interval between R-L optimisation: ",MAX_INT,1,1,50,300,100)
self.niterrlinterval.label.SetToolTipNew("")
vbox.Add(self.niterrlinterval, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.accel = SpinnerObject(self,"Acceleration: ",MAX_INT_16,1,1,1,100,100)
vbox.Add(self.accel, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
vbox.Add((1,5))
self.gammaHWHM = SpinnerObject(self,"Initial PSF HWHM: ",MAX_INT_16,0.0,0.01,0.2,300,100)
self.gammaHWHM.label.SetToolTipNew("HWHM of initial FT'd Lorentzian PSF.")
vbox.Add(self.gammaHWHM, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
title1 = wx.StaticText(self, label="Zero fill end dimensions of PSF:")
vbox.Add(title1 ,0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.zedims=[{} for i in range(3)]
self.zedims[0] = SpinnerObject(self,"i",MAX_INT_16,0,1,9,20,60)
self.zedims[1] = SpinnerObject(self,"j",MAX_INT_16,0,1,9,20,60)
self.zedims[2] = SpinnerObject(self,"k",MAX_INT_16,0,1,9,20,60)
hbox1 = wx.BoxSizer(wx.HORIZONTAL)
hbox1.Add(self.zedims[0], 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.BOTTOM, border=10)
hbox1.Add(self.zedims[1], 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.BOTTOM, border=10)
hbox1.Add(self.zedims[2], 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.BOTTOM, border=10)
vbox.Add(hbox1, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
vbox.Add((1,5))
self.chkbox_reset_gamma = wx.CheckBox(self, -1, 'Reset PSF before the next R-L optimisation cycle.', (50, 10))
self.chkbox_reset_gamma.SetValue(False)
vbox.Add(self.chkbox_reset_gamma, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.BOTTOM, border=5)
self.SetAutoLayout(True)
self.SetSizer( vbox )
def __init__(self, parent):
self.start_iter = None
wx.Panel.__init__(self, parent, style=wx.SUNKEN_BORDER)
vbox = wx.BoxSizer(wx.VERTICAL)
title = wx.StaticText(self, label="HPR Algorithm with Partial Coherence Optimisation")
vbox.Add(title ,0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.exp_amps = TextPanelObject(self, "Exp Amp: ", "",100,"Numpy files (*.npy)|*.npy|All files (*.*)|*.*")
vbox.Add(self.exp_amps, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.chkbox_sqrt_expamps = wx.CheckBox(self, -1, 'Square Root Exp Amp', (50, 10))
self.chkbox_sqrt_expamps.SetValue(True)
vbox.Add(self.chkbox_sqrt_expamps, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.BOTTOM, border=5)
self.support = TextPanelObject(self,"Support: ","",100,"Numpy files (*.npy)|*.npy|All files (*.*)|*.*")
self.support.label.SetToolTipNew("Support. If empty, previous instance will be used.")
vbox.Add(self.support, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.mask = TextPanelObject(self,"Mask: ","",100,"Numpy files (*.npy)|*.npy|All files (*.*)|*.*")
vbox.Add(self.mask, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.beta = SpinnerObject(self,"Beta: ",1.0,0.0,0.01,0.9,100,100)
vbox.Add(self.beta, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.niter = SpinnerObject(self,"Iterations: ",MAX_INT,1,1,1,100,100)
vbox.Add(self.niter, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
vbox.Add((1,5))
self.niterrlpre = SpinnerObject(self,"Iterations preceding R-L optimisation:", MAX_INT,1,1,100,300,100)
self.niterrlpre.label.SetToolTipNew("Number of HPR iterations performed before R-L Optimisation occurs.")
vbox.Add(self.niterrlpre, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.niterrl = SpinnerObject(self,"R-L iterations: ",MAX_INT,1,1,10,300,100)
self.niterrl.label.SetToolTipNew("Number of Richardon-Lucy iterations.")
vbox.Add(self.niterrl, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.niterrlinterval = SpinnerObject(self,"Interval between R-L optimisation: ",MAX_INT,1,1,50,300,100)
self.niterrlinterval.label.SetToolTipNew("")
vbox.Add(self.niterrlinterval, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.accel = SpinnerObject(self,"Acceleration: ",MAX_INT_16,1,1,1,100,100)
vbox.Add(self.accel, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
vbox.Add((1,5))
self.gammaHWHM = SpinnerObject(self,"Initial PSF HWHM: ",MAX_INT_16,0.0,0.01,0.2,300,100)
self.gammaHWHM.label.SetToolTipNew("HWHM of initial FT'd Lorentzian PSF.")
vbox.Add(self.gammaHWHM, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
title1 = wx.StaticText(self, label="Zero fill end dimensions of PSF:")
vbox.Add(title1 ,0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.zedims=[{} for i in range(3)]
self.zedims[0] = SpinnerObject(self,"i",MAX_INT_16,0,1,9,20,60)
self.zedims[1] = SpinnerObject(self,"j",MAX_INT_16,0,1,9,20,60)
self.zedims[2] = SpinnerObject(self,"k",MAX_INT_16,0,1,9,20,60)
hbox1 = wx.BoxSizer(wx.HORIZONTAL)
hbox1.Add(self.zedims[0], 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.BOTTOM, border=10)
hbox1.Add(self.zedims[1], 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.BOTTOM, border=10)
hbox1.Add(self.zedims[2], 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.BOTTOM, border=10)
vbox.Add(hbox1, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
vbox.Add((1,5))
self.chkbox_reset_gamma = wx.CheckBox(self, -1, 'Reset PSF before the next R-L optimisation cycle.', (50, 10))
self.chkbox_reset_gamma.SetValue(False)
vbox.Add(self.chkbox_reset_gamma, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.BOTTOM, border=5)
self.SetAutoLayout(True)
self.SetSizer( vbox )
def __init__(self, parent):
self.start_iter = None
wx.Panel.__init__(self, parent, style=wx.SUNKEN_BORDER)
vbox = wx.BoxSizer(wx.VERTICAL)
title = wx.StaticText(self, label="RAAR Algorithm with Partial Coherence Optimisation")
vbox.Add(title ,0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.exp_amps = TextPanelObject(self, "Exp Amp: ", "",100,"Numpy files (*.npy)|*.npy|All files (*.*)|*.*")
vbox.Add(self.exp_amps, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.chkbox_sqrt_expamps = wx.CheckBox(self, -1, 'Square Root Exp Amp', (50, 10))
self.chkbox_sqrt_expamps.SetValue(True)
vbox.Add(self.chkbox_sqrt_expamps, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.BOTTOM, border=5)
self.support = TextPanelObject(self,"Support: ","",100,"Numpy files (*.npy)|*.npy|All files (*.*)|*.*")
self.support.label.SetToolTipNew("Support. If empty, previous instance will be used.")
vbox.Add(self.support, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.mask = TextPanelObject(self,"Mask: ","",100,"Numpy files (*.npy)|*.npy|All files (*.*)|*.*")
vbox.Add(self.mask, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.beta = SpinnerObject(self,"Beta: ",1.0,0.0,0.01,0.9,100,100)
vbox.Add(self.beta, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.niter = SpinnerObject(self,"Iterations: ",MAX_INT,1,1,1,100,100)
vbox.Add(self.niter, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
vbox.Add((1,5))
self.niterrlpre = SpinnerObject(self,"Iterations preceding R-L optimisation:", MAX_INT,1,1,100,300,100)
self.niterrlpre.label.SetToolTipNew("Number of RAAR iterations performed before R-L Optimisation occurs.")
vbox.Add(self.niterrlpre, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.niterrl = SpinnerObject(self,"R-L iterations: ",MAX_INT,1,1,10,300,100)
self.niterrl.label.SetToolTipNew("Number of Richardon-Lucy iterations.")
vbox.Add(self.niterrl, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.niterrlinterval = SpinnerObject(self,"Interval between R-L optimisation: ",MAX_INT,1,1,50,300,100)
self.niterrlinterval.label.SetToolTipNew("")
vbox.Add(self.niterrlinterval, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.accel = SpinnerObject(self,"Acceleration: ",MAX_INT_16,1,1,1,100,100)
vbox.Add(self.accel, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
vbox.Add((1,5))
self.gammaHWHM = SpinnerObject(self,"Initial PSF HWHM: ",MAX_INT_16,0.0,0.01,0.2,300,100)
self.gammaHWHM.label.SetToolTipNew("HWHM of initial FT'd Lorentzian PSF.")
vbox.Add(self.gammaHWHM, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
title1 = wx.StaticText(self, label="Zero fill end dimensions of PSF:")
vbox.Add(title1 ,0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
self.zedims=[{} for i in range(3)]
self.zedims[0] = SpinnerObject(self,"i",MAX_INT_16,0,1,9,20,60)
self.zedims[1] = SpinnerObject(self,"j",MAX_INT_16,0,1,9,20,60)
self.zedims[2] = SpinnerObject(self,"k",MAX_INT_16,0,1,9,20,60)
hbox1 = wx.BoxSizer(wx.HORIZONTAL)
hbox1.Add(self.zedims[0], 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.BOTTOM, border=10)
hbox1.Add(self.zedims[1], 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.BOTTOM, border=10)
hbox1.Add(self.zedims[2], 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.BOTTOM, border=10)
vbox.Add(hbox1, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
vbox.Add((1,5))
self.chkbox_reset_gamma = wx.CheckBox(self, -1, 'Reset PSF before the next R-L optimisation cycle.', (50, 10))
self.chkbox_reset_gamma.SetValue(False)
vbox.Add(self.chkbox_reset_gamma, 0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.BOTTOM, border=5)
self.SetAutoLayout(True)
self.SetSizer( vbox )
