python类SUNKEN_BORDER的实例源码

def __init__(self, parent):
        wx.Panel.__init__(self, parent, style=wx.SUNKEN_BORDER)
        vbox = wx.BoxSizer(wx.VERTICAL)
        title = StaticTextNew(self, label="Sum or Subtract Arrays")
        title.SetToolTipNew("Sum or subtract array2 from array 1")
        vbox.Add(title ,0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.input_filename = TextPanelObject(self, "Input File 1: ", "",150,"Numpy files (*.npy)|*.npy|All files (*.*)|*.*")
        vbox.Add(self.input_filename, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.input_filename1 = TextPanelObject(self, "Input File 2: ", "",150,"Numpy files (*.npy)|*.npy|All files (*.*)|*.*")
        vbox.Add(self.input_filename1, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.output_filename = TextPanelObject(self, "Output File: ", "output.npy",150,"Numpy files (*.npy)|*.npy|All files (*.*)|*.*")
        vbox.Add(self.output_filename, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.addsub = RadioBoxNew(self, label="Add or Subtract:", choices=['Add','Subtract'],  majorDimension=2, style=wx.RA_SPECIFY_COLS)
        self.addsub.SetToolTipNew("Add or Subtract")
        vbox.Add(self.addsub, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.SetAutoLayout(True)
        self.SetSizer( vbox )

def __init__(self, parent):
        wx.Panel.__init__(self, parent, style=wx.SUNKEN_BORDER)
        vbox = wx.BoxSizer(wx.VERTICAL)
        title = StaticTextNew(self, label="Rotate Support Array")
        title.SetToolTipNew("Rotate support (binary complex) arrays only. \nStrange results will ensue if used on data arrays.")
        vbox.Add(title ,0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.input_filename = TextPanelObject(self, "Input File: ", "",150,"Numpy files (*.npy)|*.npy|All files (*.*)|*.*")
        vbox.Add(self.input_filename, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.output_filename = TextPanelObject(self, "Output File: ", "data_rotated.npy",150,"Numpy files (*.npy)|*.npy|All files (*.*)|*.*")
        vbox.Add(self.output_filename, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.rotationaxis = SpinnerObject(self,"Axis:",3,1,1,1,150,150)
        self.rotationaxis.label.SetToolTipNew("Rotation axis.")
        vbox.Add(self.rotationaxis, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.rotationangle = SpinnerObject(self,"Angle:",360,-360,1,0,150,150)
        self.rotationangle.label.SetToolTipNew("Rotation angle in degrees.")
        vbox.Add(self.rotationangle, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.SetAutoLayout(True)
        self.SetSizer( vbox )

def __init__(self, parent):
        wx.Panel.__init__(self, parent, style=wx.SUNKEN_BORDER)
        vbox = wx.BoxSizer(wx.VERTICAL)
        title = wx.StaticText(self, label="Create binary mask from Numpy array")
        vbox.Add(title ,0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.input_filename = TextPanelObject(self, "Input File: ", "",150,'*.npy')
        vbox.Add(self.input_filename, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.output_filename = TextPanelObject(self, "Output File: ", "mask.npy",150,'*.npy')
        vbox.Add(self.output_filename, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.max = SpinnerObject(self,"Maximum Value:",MAX_INT,MIN_INT,1.0,MAX_INT,150,150)
        self.max.label.SetToolTipNew("Data within the min/max range "+os.linesep+"will result in a non-zero mask value.")
        self.min = SpinnerObject(self,"Minimum Value:",MAX_INT,MIN_INT,1,50.0,150,150)
        self.min.label.SetToolTipNew("Data within the min/max range "+os.linesep+"will result in a non-zero mask value.")
        vbox.Add(self.max, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        vbox.Add(self.min, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.SetAutoLayout(True)
        self.SetSizer( vbox )

def __init__(self, parent):
        wx.Panel.__init__(self, parent, style=wx.SUNKEN_BORDER)
        vbox = wx.BoxSizer(wx.VERTICAL)
        title = StaticTextNew(self, label="Bin Numpy Array")
        title.SetToolTipNew("Input array will be binned "+os.linesep+"according to the values below.")
        vbox.Add(title ,0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.input_filename = TextPanelObject(self, "Input File: ", "",150,"Numpy files (*.npy)|*.npy|All files (*.*)|*.*")
        vbox.Add(self.input_filename, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.output_filename = TextPanelObject(self, "Output File: ", "",150,"Numpy files (*.npy)|*.npy|All files (*.*)|*.*")
        vbox.Add(self.output_filename, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        title2 = wx.StaticText(self, label="Bin dimensions: ")
        vbox.Add(title2 ,0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.bdims=[{} for i in range(3)]
        self.bdims[0] = SpinnerObject(self,"x",MAX_INT_16,1,1,1,20,60)
        self.bdims[1] = SpinnerObject(self,"y",MAX_INT_16,1,1,1,20,60)
        self.bdims[2] = SpinnerObject(self,"z",MAX_INT_16,1,1,1,20,60)
        hbox = wx.BoxSizer(wx.HORIZONTAL)
        hbox.Add(self.bdims[0], 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.BOTTOM, border=10)
        hbox.Add(self.bdims[1], 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.BOTTOM, border=10)
        hbox.Add(self.bdims[2], 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.BOTTOM, border=10)
        vbox.Add(hbox, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.SetAutoLayout(True)
        self.SetSizer( vbox )

def __init__(self, parent):
        wx.Panel.__init__(self, parent, style=wx.SUNKEN_BORDER)
        vbox = wx.BoxSizer(wx.VERTICAL)
        title = StaticTextNew(self, label="Threshold data in Numpy array")
        title.SetToolTipNew("Data outside range is set to zero.")
        vbox.Add(title ,0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.input_filename = TextPanelObject(self, "Input File: ", "",150,'*.npy')
        vbox.Add(self.input_filename, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.output_filename = TextPanelObject(self, "Output File: ", "data_thresh.npy",150,'*.npy')
        vbox.Add(self.output_filename, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.max = SpinnerObject(self,"Maximum Value:",MAX_INT,MIN_INT,1.0,MAX_INT,150,150)
        self.max.label.SetToolTipNew("Data within the min/max range "+os.linesep+"will result in a non-zero mask value.")
        self.min = SpinnerObject(self,"Minimum Value:",MAX_INT,MIN_INT,1,50.0,150,150)
        self.min.label.SetToolTipNew("Data within the min/max range "+os.linesep+"will result in a non-zero mask value.")
        vbox.Add(self.max, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        vbox.Add(self.min, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.SetAutoLayout(True)
        self.SetSizer( vbox )

def __init__(self, parent):
        wx.Panel.__init__(self, parent, style=wx.SUNKEN_BORDER)
        vbox = wx.BoxSizer(wx.VERTICAL)
        title = wx.StaticText(self, label="Filter array with median filter.")
        vbox.Add(title ,0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.input_filename = TextPanelObject(self, "Input File: ", "",150,'*.npy')
        vbox.Add(self.input_filename, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.output_filename = TextPanelObject(self, "Output File: ", "output.npy",150,'*.npy')
        vbox.Add(self.output_filename, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        title2 = wx.StaticText(self, label="Filter kernel dimensions: ")
        vbox.Add(title2 ,0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.kdims=[{} for i in range(3)]
        self.kdims[0] = SpinnerObject(self,"x",MAX_INT_16,1,1,3,20,60)
        self.kdims[1] = SpinnerObject(self,"y",MAX_INT_16,1,1,3,20,60)
        self.kdims[2] = SpinnerObject(self,"z",MAX_INT_16,1,1,1,20,60)
        hbox = wx.BoxSizer(wx.HORIZONTAL)
        hbox.Add(self.kdims[0], 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.BOTTOM, border=10)
        hbox.Add(self.kdims[1], 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.BOTTOM, border=10)
        hbox.Add(self.kdims[2], 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.BOTTOM, border=10)
        vbox.Add(hbox, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.maxdev = SpinnerObject(self,"Normal deviation:",MAX_INT_16,0.0,0.1,0.5,150,150)
        self.maxdev.label.SetToolTipNew("Maximum element-wise normal deviation.")
        vbox.Add(self.maxdev, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.SetAutoLayout(True)
        self.SetSizer( vbox )

def __init__(self,parent):
        wx.Panel.__init__(self, parent, style=wx.SUNKEN_BORDER)
        vbox = wx.BoxSizer(wx.VERTICAL)
        title = wx.StaticText(self, label="Numpy array with coordinates to VTK array")
        vbox.Add(title ,0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.input_filename = TextPanelObject(self, "Input file: ", "input.npy",150,"Numpy files (*.npy)|*.npy|All files (*.*)|*.*")
        vbox.Add(self.input_filename, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        vbox.Add((-1, 5))
        self.coords_filename = TextPanelObject(self, "Co-ord's file: ", "coordinates.npy",150,'*.npy')
        vbox.Add(self.coords_filename, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        vbox.Add((-1, 5))
        self.output_filename = TextPanelObject(self, "Output file: ", "output.vtk",150,"VTK files (*.vtk)|*.vtk|All files (*.*)|*.*")
        vbox.Add(self.output_filename, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        vbox.Add((-1, 5))
        self.rbampphase = wx.RadioBox(self, label="Type", choices=['Amplitude','Phase'],  majorDimension=2, style=wx.RA_SPECIFY_COLS)
        vbox.Add(self.rbampphase,0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.SetAutoLayout(True)
        self.SetSizer( vbox )

def __init__(self, parent):
        self.start_iter = None
        wx.Panel.__init__(self, parent, style=wx.SUNKEN_BORDER)
        vbox = wx.BoxSizer(wx.VERTICAL)
        title = wx.StaticText(self, label="HIO Algorithm")
        vbox.Add(title ,0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.exp_amps = TextPanelObject(self, "Exp Amp: ", "",100,"Numpy files (*.npy)|*.npy|All files (*.*)|*.*")
        vbox.Add(self.exp_amps, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.chkbox_sqrt_expamps = wx.CheckBox(self, -1, 'Square Root Exp Amp', (50, 10))
        self.chkbox_sqrt_expamps.SetValue(True)
        vbox.Add(self.chkbox_sqrt_expamps, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.BOTTOM, border=5)
        self.support = TextPanelObject(self,"Support: ","",100,"Numpy files (*.npy)|*.npy|All files (*.*)|*.*")
        self.support.label.SetToolTipNew("Support. If empty, previous instance will be used.")
        vbox.Add(self.support, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.beta = SpinnerObject(self,"Beta: ",1.0,0.0,0.01,0.9,100,100)
        vbox.Add(self.beta, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.niter = SpinnerObject(self,"Iterations: ",MAX_INT,1,1,1,100,100)
        vbox.Add(self.niter, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.SetAutoLayout(True)
        self.SetSizer( vbox )

def __init__(self, parent):
        self.start_iter = None
        wx.Panel.__init__(self, parent, style=wx.SUNKEN_BORDER)
        vbox = wx.BoxSizer(wx.VERTICAL)
        title = wx.StaticText(self, label="ER Algorithm")
        vbox.Add(title ,0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.exp_amps = TextPanelObject(self, "Exp Amp: ", "",100,"Numpy files (*.npy)|*.npy|All files (*.*)|*.*")
        vbox.Add(self.exp_amps, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.chkbox_sqrt_expamps = wx.CheckBox(self, -1, 'Square Root Exp Amp', (50, 10))
        self.chkbox_sqrt_expamps.SetValue(True)
        vbox.Add(self.chkbox_sqrt_expamps, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.BOTTOM, border=5)
        self.support = TextPanelObject(self,"Support: ","",100,"Numpy files (*.npy)|*.npy|All files (*.*)|*.*")
        self.support.label.SetToolTipNew("Support. If empty, previous instance will be used.")
        vbox.Add(self.support, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        #self.mask = TextPanelObject(self,"Mask: ","",100,"Numpy files (*.npy)|*.npy|All files (*.*)|*.*")
        #vbox.Add(self.mask, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.niter = SpinnerObject(self,"Iterations: ",MAX_INT,1,1,1,100,100)
        vbox.Add(self.niter, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.SetAutoLayout(True)
        self.SetSizer( vbox )

def __init__(self, parent):
        self.start_iter = None
        wx.Panel.__init__(self, parent, style=wx.SUNKEN_BORDER)
        vbox = wx.BoxSizer(wx.VERTICAL)
        title = wx.StaticText(self, label="Phase-Only Algorithm")
        vbox.Add(title ,0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.exp_amps = TextPanelObject(self, "Exp Amp: ", "",100,"Numpy files (*.npy)|*.npy|All files (*.*)|*.*")
        vbox.Add(self.exp_amps, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.chkbox_sqrt_expamps = wx.CheckBox(self, -1, 'Square Root Exp Amp', (50, 10))
        self.chkbox_sqrt_expamps.SetValue(True)
        vbox.Add(self.chkbox_sqrt_expamps, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.BOTTOM, border=5)
        self.support = TextPanelObject(self,"Support: ","",100,"Numpy files (*.npy)|*.npy|All files (*.*)|*.*")
        self.support.label.SetToolTipNew("Support. If empty, previous instance will be used.")
        vbox.Add(self.support, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.mask = TextPanelObject(self,"Mask: ","",100,"Numpy files (*.npy)|*.npy|All files (*.*)|*.*")
        vbox.Add(self.mask, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.niter = SpinnerObject(self,"Iterations: ",MAX_INT,1,1,1,100,100)
        vbox.Add(self.niter, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.SetAutoLayout(True)
        self.SetSizer( vbox )

def __init__(self, parent):
        self.start_iter = None
        wx.Panel.__init__(self, parent, style=wx.SUNKEN_BORDER)
        vbox = wx.BoxSizer(wx.VERTICAL)
        title = wx.StaticText(self, label="HIO Algorithm with positivity constraint")
        vbox.Add(title ,0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.exp_amps = TextPanelObject(self, "Exp Amp: ", "",100,"Numpy files (*.npy)|*.npy|All files (*.*)|*.*")
        vbox.Add(self.exp_amps, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.chkbox_sqrt_expamps = wx.CheckBox(self, -1, 'Square Root Exp Amp', (50, 10))
        self.chkbox_sqrt_expamps.SetValue(True)
        vbox.Add(self.chkbox_sqrt_expamps, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.BOTTOM, border=5)
        self.support = TextPanelObject(self,"Support: ","",100,"Numpy files (*.npy)|*.npy|All files (*.*)|*.*")
        self.support.label.SetToolTipNew("Support. If empty, previous instance will be used.")
        vbox.Add(self.support, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.mask = TextPanelObject(self,"Mask: ","",100,"Numpy files (*.npy)|*.npy|All files (*.*)|*.*")
        vbox.Add(self.mask, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.beta = SpinnerObject(self,"Beta: ",1.0,0.0,0.01,0.9,100,100)
        vbox.Add(self.beta, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.niter = SpinnerObject(self,"Iterations: ",MAX_INT,1,1,1,100,100)
        vbox.Add(self.niter, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.SetAutoLayout(True)
        self.SetSizer( vbox )

def _init_ctrls(self, parent):
        wx.SplitterWindow.__init__(self, parent,
                                   style=wx.SUNKEN_BORDER | wx.SP_3D)
        self.SetMinimumPaneSize(1)

        self._init_MenuItems()

        if self.VARIABLE_PANEL_TYPE is not None:
            self.VariableEditor = VariablePanel(self, self, self.Controler, self.VARIABLE_PANEL_TYPE, self.Debug)
            self.VariableEditor.SetTagName(self.TagName)
        else:
            self.VariableEditor = None

        self._init_Editor(self)

        if self.Editor is not None and self.VariableEditor is not None:
            self.SplitHorizontally(self.VariableEditor, self.Editor, 200)
        elif self.VariableEditor is not None:
            self.Initialize(self.VariableEditor)
        elif self.Editor is not None:
            self.Initialize(self.Editor)

def __init__(self, parent, run, api):
        """Initialize the RunPanel.

        Args:
            parent: The parent Window for this panel.
            run: The sequencing run that should be displayed.
            api: An initialized instance of an API for interacting with IRIDA.
        """
        ScrolledPanel.__init__(self, parent, style=wx.SUNKEN_BORDER)
        box = wx.StaticBox(self, label=run.sample_sheet_name)
        self._timer = wx.Timer(self)

        self._run = run

        self._progress_value = 0
        self._last_progress = 0
        self._last_timer_progress = 0
        self._sample_panels = {}
        # the current overall progress for the run is calculated as a percentage
        # of the total file size of all samples in the run.
        self._progress_max = sum(sample.get_files_size() for sample in run.samples_to_upload)
        logging.info("Total file size for run is {}".format(self._progress_max))

        self._sizer = wx.StaticBoxSizer(box, wx.VERTICAL)

        pub.subscribe(self._upload_started, run.upload_started_topic)
        pub.subscribe(self._handle_progress, run.upload_progress_topic)
        pub.subscribe(self._upload_complete, run.upload_completed_topic)
        pub.subscribe(self._upload_failed, run.upload_failed_topic)

        for sample in run.sample_list:
            self._sample_panels[sample.get_id()] = SamplePanel(self, sample, run, api)
            self._sizer.Add(self._sample_panels[sample.get_id()], flag=wx.EXPAND | wx.LEFT | wx.RIGHT, border=5)

        self.SetSizer(self._sizer)
        self.Bind(wx.EVT_TIMER, self._update_progress_timer, self._timer)
        self.Layout()
        self.SetupScrolling()

def initMPlayer(self):
        self.mplayer = widgets.MPlayerPanel(self,
                cwd=self.pg.defaultMusicDir, style=wx.SUNKEN_BORDER)

def __init__(self, parent,ancestor):
        wx.Panel.__init__(self, parent, style=wx.SUNKEN_BORDER)
        vbox = wx.BoxSizer(wx.VERTICAL)
        title = StaticTextNew(self, label="Pipeline Comments:")
        title.SetToolTipNew("Pipeline Comments.")
        vbox.Add(title ,0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.txt = wx.TextCtrl(self, style=wx.TE_BESTWRAP | wx.TE_MULTILINE)
        self.txt.Enable(True)
        vbox.Add(self.txt, 1, wx.EXPAND | wx.ALL, 2)
        self.SetAutoLayout(True)
        self.SetSizer( vbox )

def __init__(self, parent):
        wx.Panel.__init__(self, parent, style=wx.SUNKEN_BORDER)
        vbox = wx.BoxSizer(wx.VERTICAL)
        title = StaticTextNew(self, label="Scale Arrays")
        title.SetToolTipNew("Scale array by a specified factor")
        vbox.Add(title ,0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.input_filename = TextPanelObject(self, "Input File: ", "",150,"Numpy files (*.npy)|*.npy|All files (*.*)|*.*")
        vbox.Add(self.input_filename, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.output_filename = TextPanelObject(self, "Output File: ", "output.npy",150,"Numpy files (*.npy)|*.npy|All files (*.*)|*.*")
        vbox.Add(self.output_filename, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.scale = SpinnerObject(self,"Scale factor:",MAX_INT,0.0,1.0,1.0,150,150)
        self.scale.label.SetToolTipNew("Scale factor.")
        vbox.Add(self.scale, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.SetAutoLayout(True)
        self.SetSizer( vbox )

def __init__(self, parent):
        wx.Panel.__init__(self, parent, style=wx.SUNKEN_BORDER)
        self.panelphase = self.GetParent().GetParent().GetParent()
        self.font = self.GetParent().font
        self.file = None
        vbox = wx.BoxSizer(wx.VERTICAL)
        title = wx.StaticText(self, label="Convert HDF5 to Numpy array.")
        vbox.Add(title ,0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.input_filename = TextPanelObject(self, "Input HDF5 File: ", "",150,"HDF files (*.hdf)|*.hdf|HDF5 files (*.h5)|*.h5|All files (*.*)|*.*")
        vbox.Add(self.input_filename, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        hbox = wx.BoxSizer(wx.HORIZONTAL)
        label = wx.StaticText(self, -1,"HDF Key Path:" , style =wx.ALIGN_RIGHT, size=(150,-1) )
        label.SetFont(self.font)
        hbox.Add( label, 0, wx.CENTER )
        def OnEdit(event):
            self.objectpath.ChangeValue(event.GetString())
        self.objectpath = TextCtrlNew(self, -1)
        self.objectpath.SetFont(self.font)
        self.objectpath.SetValue("")
        self.objectpath.SetToolTipNew("Comma separated key names.")
        self.objectpath.Bind(wx.EVT_TEXT_ENTER, OnEdit)
        hbox.Add( self.objectpath, 1, wx.CENTER |wx.EXPAND )
        self.button = ButtonNew(self, -1, "Browse")
        self.button.SetFont(self.font)
        self.button.SetToolTipNew("Browse for HDF5 key path.")
        self.button.Bind(wx.EVT_BUTTON, self.OnBrowse)
        hbox.Add( self.button, 0, wx.LEFT|wx.CENTER)
        vbox.Add(hbox, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.output_filename = TextPanelObject(self, "Output File: ", "output.npy",150,'*.npy')
        vbox.Add(self.output_filename, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.SetAutoLayout(True)
        self.SetSizer( vbox )

def __init__(self, parent):
        wx.Panel.__init__(self, parent, style=wx.SUNKEN_BORDER)
        vbox = wx.BoxSizer(wx.VERTICAL)
        title = wx.StaticText(self, label="Convert SPE to Numpy array")
        vbox.Add(title ,0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.input_filename = TextPanelObject(self, "Input SPE File: ", "",150,'*.SPE')
        vbox.Add(self.input_filename, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.output_filename = TextPanelObject(self, "Output File: ", "",150,'*.npy')
        vbox.Add(self.output_filename, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.SetAutoLayout(True)
        self.SetSizer( vbox )

def __init__(self, parent):
        wx.Panel.__init__(self, parent, style=wx.SUNKEN_BORDER)
        vbox = wx.BoxSizer(wx.VERTICAL)
        title = wx.StaticText(self, label="Convert Image file to Numpy array")
        vbox.Add(title ,0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.input_filename = TextPanelObject(self, "Input Image File: ", "",150,"PNG files (*.png)|*.png|JPEG files (*.jpg)|*.jpg|PPM files (*.ppm)|*.ppm|TIF files (*.tif)|*.tif|All files (*.*)|*.*")
        vbox.Add(self.input_filename, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.output_filename = TextPanelObject(self, "Output File: ", "",150,'*.npy')
        vbox.Add(self.output_filename, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.SetAutoLayout(True)
        self.SetSizer( vbox )

def __init__(self, parent):
        wx.Panel.__init__(self, parent, style=wx.SUNKEN_BORDER)
        vbox = wx.BoxSizer(wx.VERTICAL)
        title = StaticTextNew(self, label="Load Array to Memory Location")
        title.SetToolTipNew("Memory locations: memory0, memory1, ... , memory9")
        vbox.Add(title ,0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.input_filename = TextPanelObject(self, "Input File: ", "",150,"Numpy files (*.npy)|*.npy|All files (*.*)|*.*")
        vbox.Add(self.input_filename, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.output_filename = TextPanelObject(self, "Output File: ", "memory0",150,"Numpy files (*.npy)|*.npy|All files (*.*)|*.*")
        vbox.Add(self.output_filename, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.SetAutoLayout(True)
        self.SetSizer( vbox )

def __init__(self, parent):
        wx.Panel.__init__(self, parent, style=wx.SUNKEN_BORDER)
        vbox = wx.BoxSizer(wx.VERTICAL)
        title = StaticTextNew(self, label="Save Array from Memory Location")
        title.SetToolTipNew("Memory locations: memory0, memory1, ... , memory9")
        vbox.Add(title ,0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.input_filename = TextPanelObject(self, "Input File: ", "memory0",150,"Numpy files (*.npy)|*.npy|All files (*.*)|*.*")
        vbox.Add(self.input_filename, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.output_filename = TextPanelObject(self, "Output File: ", "",150,"Numpy files (*.npy)|*.npy|All files (*.*)|*.*")
        vbox.Add(self.output_filename, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.SetAutoLayout(True)
        self.SetSizer( vbox )

def __init__(self, parent):
        wx.Panel.__init__(self, parent, style=wx.SUNKEN_BORDER)
        vbox = wx.BoxSizer(wx.VERTICAL)
        title = StaticTextNew(self, label="Save Fourier Tranform of Point Spread function.")
        title.SetToolTipNew("Save Fourier Tranform of Point Spread function.")
        vbox.Add(title ,0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.output_filename = TextPanelObject(self, "Output File: ", "",150,"Numpy files (*.npy)|*.npy|All files (*.*)|*.*")
        vbox.Add(self.output_filename, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.SetAutoLayout(True)
        self.SetSizer( vbox )

def __init__(self, parent):
        wx.Panel.__init__(self, parent, style=wx.SUNKEN_BORDER)
        vbox = wx.BoxSizer(wx.VERTICAL)
        title = StaticTextNew(self, label="Auto Centre Numpy Array")
        title.SetToolTipNew("Input array will be Auto Centred "+os.linesep+"according to the brightest voxel.")
        vbox.Add(title ,0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.input_filename = TextPanelObject(self, "Input File: ", "",150,"Numpy files (*.npy)|*.npy|All files (*.*)|*.*")
        vbox.Add(self.input_filename, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.output_filename = TextPanelObject(self, "Output File: ", "",150,"Numpy files (*.npy)|*.npy|All files (*.*)|*.*")
        vbox.Add(self.output_filename, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.SetAutoLayout(True)
        self.SetSizer( vbox )

def __init__(self, parent):
        wx.Panel.__init__(self, parent, style=wx.SUNKEN_BORDER)
        vbox = wx.BoxSizer(wx.VERTICAL)
        title = wx.StaticText(self, label="Fill Numpy array with Gaussian distribution.")
        vbox.Add(title ,0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.input_filename = TextPanelObject(self, "Input File: ", "",150,'*.npy')
        vbox.Add(self.input_filename, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.output_filename = TextPanelObject(self, "Output File: ", "data_gaussian.npy",150,'*.npy')
        vbox.Add(self.output_filename, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.sigma = SpinnerObject(self,"Sigma:",MAX_INT_16,0.0,0.1,2.0,150,150)
        self.sigma.label.SetToolTipNew("Standard deviation.")
        vbox.Add(self.sigma, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.SetAutoLayout(True)
        self.SetSizer( vbox )

def __init__(self, parent):
        wx.Panel.__init__(self, parent, style=wx.SUNKEN_BORDER)
        vbox = wx.BoxSizer(wx.VERTICAL)
        title = StaticTextNew(self, label="Fourier Transform Array")
        title.SetToolTipNew("Fourier Transform Input Array.")
        vbox.Add(title ,0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.input_filename = TextPanelObject(self, "Input File: ", "",150,"Numpy files (*.npy)|*.npy|All files (*.*)|*.*")
        vbox.Add(self.input_filename, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.output_filename = TextPanelObject(self, "Output File: ", "",150,"Numpy files (*.npy)|*.npy|All files (*.*)|*.*")
        vbox.Add(self.output_filename, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        vbox.Add((-1, 5))
        self.rbdirection = wx.RadioBox(self, label="To:", choices=['Fourier Space','Real Space',],  majorDimension=2, style=wx.RA_SPECIFY_COLS)
        vbox.Add(self.rbdirection ,0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.SetAutoLayout(True)
        self.SetSizer( vbox )

def __init__(self, parent):
        wx.Panel.__init__(self, parent, style=wx.SUNKEN_BORDER)
        vbox = wx.BoxSizer(wx.VERTICAL)
        title = StaticTextNew(self, label="Conjugate and Reflect Array")
        title.SetToolTipNew("Conjugate and Reflect Array.")
        vbox.Add(title ,0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.input_filename = TextPanelObject(self, "Input File: ", "",150,"Numpy files (*.npy)|*.npy|All files (*.*)|*.*")
        vbox.Add(self.input_filename, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.output_filename = TextPanelObject(self, "Output File: ", "",150,"Numpy files (*.npy)|*.npy|All files (*.*)|*.*")
        vbox.Add(self.output_filename, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.SetAutoLayout(True)
        self.SetSizer( vbox )

def __init__(self, parent):
        wx.Panel.__init__(self, parent, style=wx.SUNKEN_BORDER)
        vbox = wx.BoxSizer(wx.VERTICAL)
        title = StaticTextNew(self, label="Make Cuboid Support")
        title.SetToolTipNew("Support is made using the (x,y,z) values below."+os.linesep+"If an additional numpy array is supplied, its "+os.linesep+"dimensions will be used.")
        vbox.Add(title ,0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.filename = TextPanelObject(self, "Support File: ", "support.npy",150,"Numpy files (*.npy)|*.npy|All files (*.*)|*.*")
        vbox.Add(self.filename, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.fromfile = TextPanelObject(self, "(x,y,z) from array: ", "",150,"Numpy files (*.npy)|*.npy|All files (*.*)|*.*")
        vbox.Add(self.fromfile, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        title2 = wx.StaticText(self, label="(x,y,z) from dimensions: ")
        vbox.Add(title2 ,0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.dims=[{} for i in range(3)]
        self.dims[0] = SpinnerObject(self,"x",MAX_INT_16,1,1,1,20,60)
        self.dims[1] = SpinnerObject(self,"y",MAX_INT_16,1,1,1,20,60)
        self.dims[2] = SpinnerObject(self,"z",MAX_INT_16,1,1,1,20,60)
        hbox = wx.BoxSizer(wx.HORIZONTAL)
        hbox.Add(self.dims[0], 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.BOTTOM, border=10)
        hbox.Add(self.dims[1], 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.BOTTOM, border=10)
        hbox.Add(self.dims[2], 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.BOTTOM, border=10)
        vbox.Add(hbox, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        title3 = wx.StaticText(self, label="Support size: ")
        vbox.Add(title3 ,0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.sdims=[{} for i in range(3)]
        self.sdims[0] = SpinnerObject(self,"sx",MAX_INT_16,1,1,1,20,60)
        self.sdims[1] = SpinnerObject(self,"sy",MAX_INT_16,1,1,1,20,60)
        self.sdims[2] = SpinnerObject(self,"sz",MAX_INT_16,1,1,1,20,60)
        hbox1 = wx.BoxSizer(wx.HORIZONTAL)
        hbox1.Add(self.sdims[0], 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.BOTTOM, border=10)
        hbox1.Add(self.sdims[1], 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.BOTTOM, border=10)
        hbox1.Add(self.sdims[2], 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.BOTTOM, border=10)
        vbox.Add(hbox1, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.SetAutoLayout(True)
        self.SetSizer( vbox )

def __init__(self,parent):
        wx.Panel.__init__(self, parent, style=wx.SUNKEN_BORDER)
        vbox = wx.BoxSizer(wx.VERTICAL)
        title = wx.StaticText(self, label="Numpy array to VTK array")
        vbox.Add(title ,0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.input_filename = TextPanelObject(self, "Input file: ", "input.npy",150,"Numpy files (*.npy)|*.npy|All files (*.*)|*.*")
        vbox.Add(self.input_filename, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        vbox.Add((-1, 5))
        self.output_filename = TextPanelObject(self, "Output file: ", "output.vtk",150,"VTK files (*.vtk)|*.vtk|All files (*.*)|*.*")
        vbox.Add(self.output_filename, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        vbox.Add((-1, 5))
        self.rbampphase = wx.RadioBox(self, label="Type", choices=['Amplitude','Phase'],  majorDimension=2, style=wx.RA_SPECIFY_COLS)
        vbox.Add(self.rbampphase,0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.SetAutoLayout(True)
        self.SetSizer( vbox )

def __init__(self, parent):
        self.start_iter = None
        wx.Panel.__init__(self, parent, style=wx.SUNKEN_BORDER)
        vbox = wx.BoxSizer(wx.VERTICAL)
        title = StaticTextNew(self, label="Input Array Start")
        title.SetToolTipNew("Phase reconstruction will begin with this array.")
        vbox.Add(title ,0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.input_filename = TextPanelObject(self, "Input File: ", "",150,'*.npy')
        vbox.Add(self.input_filename, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.SetAutoLayout(True)
        self.SetSizer( vbox )

def __init__(self, parent):
        self.start_iter = None
        wx.Panel.__init__(self, parent, style=wx.SUNKEN_BORDER)
        vbox = wx.BoxSizer(wx.VERTICAL)
        title = wx.StaticText(self, label="ER Mask Algorithm")
        vbox.Add(title ,0, flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.exp_amps = TextPanelObject(self, "Exp Amp: ", "",100,"Numpy files (*.npy)|*.npy|All files (*.*)|*.*")
        vbox.Add(self.exp_amps, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.chkbox_sqrt_expamps = wx.CheckBox(self, -1, 'Square Root Exp Amp', (50, 10))
        self.chkbox_sqrt_expamps.SetValue(True)
        vbox.Add(self.chkbox_sqrt_expamps, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.BOTTOM, border=5)
        self.support = TextPanelObject(self,"Support: ","",100,"Numpy files (*.npy)|*.npy|All files (*.*)|*.*")
        self.support.label.SetToolTipNew("Support. If empty, previous instance will be used.")
        vbox.Add(self.support, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.mask = TextPanelObject(self,"Mask: ","",100,"Numpy files (*.npy)|*.npy|All files (*.*)|*.*")
        vbox.Add(self.mask, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.niter = SpinnerObject(self,"Iterations: ",MAX_INT,1,1,1,100,100)
        vbox.Add(self.niter, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        vbox.Add((-1, 5))
        self.chkbox = CheckBoxNew(self, -1, 'Relax Modulus Constraint', size=(200, 20))
        self.chkbox.SetToolTipNew("Do not apply modulus constraint if the change in amplitude"+os.linesep+" is within the Poisson noise.")
        self.chkbox.Bind(wx.EVT_CHECKBOX, self.OnCheck)
        vbox.Add(self.chkbox, 0,flag=wx.EXPAND|wx.LEFT|wx.RIGHT, border=2)
        self.niter_relax = SpinnerObject(self,"Relax iters: ",MAX_INT,0,1,0,100,100)
        self.niter_relax.label.SetToolTipNew("Reduce the relaxtion to zero linearly over this many iterations.")
        self.niter_relax.Disable()
        vbox.Add(self.niter_relax, 0,  flag=wx.EXPAND|wx.LEFT|wx.RIGHT|wx.TOP, border=2)
        self.chkbox.Hide()
        self.niter_relax.Hide()
        vbox.Add((-1, 5))
        self.SetAutoLayout(True)
        self.SetSizer( vbox )