python类trace()的实例源码

def _mmd2(K_XX, K_XY, K_YY, const_diagonal=False, biased=False):
    m = tf.cast(K_XX.get_shape()[0], tf.float32)
    n = tf.cast(K_YY.get_shape()[0], tf.float32)

    if biased:
        mmd2 = (tf.reduce_sum(K_XX) / (m * m)
              + tf.reduce_sum(K_YY) / (n * n)
              - 2 * tf.reduce_sum(K_XY) / (m * n))
    else:
        if const_diagonal is not False:
            trace_X = m * const_diagonal
            trace_Y = n * const_diagonal
        else:
            trace_X = tf.trace(K_XX)
            trace_Y = tf.trace(K_YY)

        mmd2 = ((tf.reduce_sum(K_XX) - trace_X) / (m * (m - 1))
              + (tf.reduce_sum(K_YY) - trace_Y) / (n * (n - 1))
              - 2 * tf.reduce_sum(K_XY) / (m * n))

    return mmd2

def _mmd2(K_XX, K_XY, K_YY, const_diagonal=False, biased=False):
    m = tf.cast(K_XX.get_shape()[0], tf.float32)
    n = tf.cast(K_YY.get_shape()[0], tf.float32)
   # m=50
    #n=50
    if biased:
        mmd2 = (tf.reduce_sum(K_XX) / (m * m)
              + tf.reduce_sum(K_YY) / (n * n)
              - 2 * tf.reduce_sum(K_XY) / (m * n))
    else:
        if const_diagonal is not False:
            trace_X = m * const_diagonal
            trace_Y = n * const_diagonal
        else:
            trace_X = tf.trace(K_XX)
            trace_Y = tf.trace(K_YY)

        mmd2 = ((tf.reduce_sum(K_XX) - trace_X) / (m * (m - 1))
              + (tf.reduce_sum(K_YY) - trace_Y) / (n * (n - 1))
              - 2 * tf.reduce_sum(K_XY) / (m * n))

    return mmd2

def _build_cross_ent(self, weights, means, covars, kernel_chol):
        cross_ent = 0.0
        for i in xrange(self.num_components):
            sum_val = 0.0
            for j in xrange(self.num_latent):
                if self.diag_post:
                    # TODO(karl): this is a bit inefficient since we're not making use of the fact
                    # that covars is diagonal. A solution most likely involves a custom tf op.
                    trace = tf.trace(tf.cholesky_solve(kernel_chol[j, :, :],
                                                       tf.diag(covars[i, j, :])))
                else:
                    trace = tf.reduce_sum(util.diag_mul(
                        tf.cholesky_solve(kernel_chol[j, :, :], covars[i, j, :, :]),
                        tf.transpose(covars[i, j, :, :])))

                sum_val += (util.CholNormal(means[i, j, :], kernel_chol[j, :, :]).log_prob(0.0) -
                            0.5 * trace)

            cross_ent += weights[i] * sum_val

        return cross_ent

def get_value_updater(self, data, new_mean, gamma_weighted, gamma_sum):
        tf_new_differences = tf.subtract(data, tf.expand_dims(new_mean, 0))
        tf_sq_dist_matrix = tf.matmul(tf.expand_dims(tf_new_differences, 2), tf.expand_dims(tf_new_differences, 1))
        tf_new_covariance = tf.reduce_sum(tf_sq_dist_matrix * tf.expand_dims(tf.expand_dims(gamma_weighted, 1), 2), 0)

        if self.has_prior:
            tf_new_covariance = self.get_prior_adjustment(tf_new_covariance, gamma_sum)

        tf_s, tf_u, _ = tf.svd(tf_new_covariance)

        tf_required_eigvals = tf_s[:self.rank]
        tf_required_eigvecs = tf_u[:, :self.rank]

        tf_new_baseline = (tf.trace(tf_new_covariance) - tf.reduce_sum(tf_required_eigvals)) / self.tf_rest
        tf_new_eigvals = tf_required_eigvals - tf_new_baseline
        tf_new_eigvecs = tf.transpose(tf_required_eigvecs)

        return tf.group(
            self.tf_baseline.assign(tf_new_baseline),
            self.tf_eigvals.assign(tf_new_eigvals),
            self.tf_eigvecs.assign(tf_new_eigvecs)
        )

def get_e_A_sym(self, P_var, mu_var, policy_mu_var, policy_sigma_var):
        e_A_var1 = self.get_A_sym(P_var, mu_var, policy_mu_var)
        e_A_var2 = - 0.5 * tf.reduce_sum(tf.matrix_diag_part(
            tf.matmul(P_var, policy_sigma_var)), 1)
        #e_A_var2 = - 0.5 * tf.trace(tf.matmul(P_var, policy_sigma_var))
        return e_A_var1 + e_A_var2

def trace_sqrt_product(sigma, sigma_v):
    """Find the trace of the positive sqrt of product of covariance matrices.
    '_symmetric_matrix_square_root' only works for symmetric matrices, so we
    cannot just take _symmetric_matrix_square_root(sigma * sigma_v).
    ('sigma' and 'sigma_v' are symmetric, but their product is not necessarily).
    Let sigma = A A so A = sqrt(sigma), and sigma_v = B B.
    We want to find trace(sqrt(sigma sigma_v)) = trace(sqrt(A A B B))
    Note the following properties:
    (i) forall M1, M2: eigenvalues(M1 M2) = eigenvalues(M2 M1)
       => eigenvalues(A A B B) = eigenvalues (A B B A)
    (ii) if M1 = sqrt(M2), then eigenvalues(M1) = sqrt(eigenvalues(M2))
       => eigenvalues(sqrt(sigma sigma_v)) = sqrt(eigenvalues(A B B A))
    (iii) forall M: trace(M) = sum(eigenvalues(M))
       => trace(sqrt(sigma sigma_v)) = sum(eigenvalues(sqrt(sigma sigma_v)))
                                     = sum(sqrt(eigenvalues(A B B A)))
                                     = sum(eigenvalues(sqrt(A B B A)))
                                     = trace(sqrt(A B B A))
                                     = trace(sqrt(A sigma_v A))
    A = sqrt(sigma). Both sigma and A sigma_v A are symmetric, so we **can**
    use the _symmetric_matrix_square_root function to find the roots of these
    matrices.
    Args:
      sigma: a square, symmetric, real, positive semi-definite covariance matrix
      sigma_v: same as sigma
    Returns:
      The trace of the positive square root of sigma*sigma_v
    """

    # Note sqrt_sigma is called "A" in the proof above
    sqrt_sigma = _symmetric_matrix_square_root(sigma)

    # This is sqrt(A sigma_v A) above
    sqrt_a_sigmav_a = tf.matmul(
        sqrt_sigma, tf.matmul(sigma_v, sqrt_sigma))

    return tf.trace(_symmetric_matrix_square_root(sqrt_a_sigmav_a))

def getSparcityPrior(inputX, C_init=None, lambda1=0.01, lambda2=10000, optimizer='Adam', epochs=10000, learning_rate=0.1, print_step=50):
    tf.reset_default_graph()

    n_feat, n_sample = inputX.shape

    X = tf.placeholder(dtype=tf.float32, shape=[n_feat, n_sample], name='X')

    if C_init is None:
        C = tf.Variable(tf.random_uniform([n_sample, n_sample], -1, 1), name='C')
    else:
        C = tf.Variable(C_init, name='C')

    loss = X - tf.matmul(X, C)
    loss = tf.reduce_mean(tf.square(loss))

    # Create sparseness in C
    reg_lossC = tf.reduce_mean(abs(C))  # L1 loss for C

    # Force the entries in the diagonal of C to be zero
    reg_lossD = tf.trace(tf.square(C))/n_sample

    cost = loss + lambda1 * reg_lossC + lambda2 * reg_lossD
    optimizer = optimize(cost, learning_rate, optimizer)

    saver = tf.train.Saver()
    # Optimizing the function
    with tf.Session() as sess:
        sess.run(tf.initialize_all_variables())
        print("Calculating C ...")
        for i in xrange(1, epochs+1):
            sess.run(optimizer, feed_dict={X: inputX})
            loss = sess.run(cost, feed_dict={X: inputX})
            if i % print_step == 0:
                print('epoch {0}: global loss = {1}'.format(i, loss))
            if i % 50 == 0:
                save_path = saver.save(sess, "./model_C_"+str(i)+".ckpt")
                print("Model saved in file: %s" % save_path)

        C_val = sess.run(C)

        return C_val
        # Add ops to save and restore all the variables.


  # Save the variables to disk.

def test_trace(self):
        t = tf.trace(self.random(3, 3))
        self.check(t)

def block_method():
    g = tf.Graph()

    with g.as_default():
        matrices = {}
        for i in range(0, d):
            for j in range(0, d):
                with tf.device("/job:worker/task:%d" % ((i*(d-1)+j) % worker_num)):
                    matrix_name = get_block_name(i, j)
                    matrices[matrix_name] = tf.random_uniform([M, M], name=matrix_name)

        intermediate_traces = {}
        for i in range(0, d):
            for j in range(0, d):
                with tf.device("/job:worker/task:%d" % ((i*(d-1)+j) % worker_num)):
                    A = matrices[get_block_name(i, j)]
                    B = matrices[get_block_name(j, i)]
                    intermediate_traces[get_intermediate_trace_name(i, j)] = tf.trace(tf.matmul(A, B))

        with tf.device("/job:worker/task:0"):
            retval = tf.add_n(intermediate_traces.values())

        config = tf.ConfigProto(log_device_placement=True)
        with tf.Session("grpc://vm-22-2:2222", config=config) as sess:
            result = sess.run(retval)
            sess.close()
            print result