python类ElasticNetCV()的实例源码

def __remodel__(self, model_type, regr, __X_train, __Y_train):
        """
        Function to retrain certain models based on optimal alphas and/or ratios
        """
        if model_type == "ridge":
            alpha = regr.alpha_
            regr = linear_model.RidgeCV(alphas = self.__realpha__(alpha), cv = 10)
        elif model_type == "lasso":
            alpha = regr.alpha_
            regr = linear_model.LassoCV(alphas = self.__realpha__(alpha), max_iter = 5000, cv = 10)
        elif model_type == "elasticnet":
            alpha = regr.alpha_
            ratio = regr.l1_ratio_
            regr = linear_model.ElasticNetCV(l1_ratio = self.__reratio__(ratio), alphas = self.__elasticnet_init["alpha"], max_iter = 1000, cv = 3)

        regr.fit(__X_train, __Y_train)
        return regr

def predict(train):
    binary = (train > 0)
    reg = ElasticNetCV(fit_intercept=True, alphas=[
                       0.0125, 0.025, 0.05, .125, .25, .5, 1., 2., 4.])
    norm = NormalizePositive()
    train = norm.fit_transform(train)

    filled = train.copy()
    # iterate over all users
    for u in range(train.shape[0]):
        # remove the current user for training
        curtrain = np.delete(train, u, axis=0)
        bu = binary[u]
        if np.sum(bu) > 5:
            reg.fit(curtrain[:,bu].T, train[u, bu])

            # Fill the values that were not there already
            filled[u, ~bu] = reg.predict(curtrain[:,~bu].T)
    return norm.inverse_transform(filled)

def train_EN_model(_train_x, train_y, _predict_x):
    print_title("ElasticNet")
    train_x, predict_x = \
        standarize_feature(_train_x, _predict_x)

    #l1_ratios = [1e-4, 1e-3, 1e-2, 1e-1]
    #l1_ratios = [1e-5, 1e-4, 1e-3]
    l1_ratios = [0.9, 0.92, 0.95, 0.97, 0.99]
    #l1_ratios = [0.5]
    min_mse = 1
    for r in l1_ratios:
        t1 = time.time()
        reg_en = linear_model.ElasticNetCV(
            l1_ratio=r, cv=5, n_jobs=4, verbose=1, precompute=True)
        reg_en.fit(train_x, train_y)
        n_nonzeros = (reg_en.coef_ != 0).sum()
        _mse = np.mean(reg_en.mse_path_, axis=1)[
            np.where(reg_en.alphas_ == reg_en.alpha_)[0][0]]
        if _mse < min_mse:
            min_mse = _mse
            best_l1_ratio = r
            best_alpha = reg_en.alpha_
        t2 = time.time()
        print("ratio(%e) -- n: %d -- alpha: %f -- mse: %f -- "
              "time: %.2f sec" %
              (r, n_nonzeros, reg_en.alpha_, _mse, t2 - t1))

    print("Best l1_ratio and alpha: %f, %f" % (best_l1_ratio, best_alpha))
    # predict_model
    reg = linear_model.ElasticNet(l1_ratio=best_l1_ratio, alpha=best_alpha)
    reg.fit(train_x, train_y)
    predict_y = reg.predict(predict_x)
    train_y_pred = reg.predict(train_x)
    return {"y": predict_y, "train_y": train_y_pred, "coef": reg.coef_}

def test_get_errors_param(self):
        """
        Test known models we can get the cv errors for alpha selection
        """

        # Test original CV models
        for model in (RidgeCV, LassoCV, LassoLarsCV, ElasticNetCV):
            try:
                model = AlphaSelection(model())

                X, y = make_regression()
                model.fit(X, y)

                errors = model._find_errors_param()
                self.assertTrue(len(errors) > 0)
            except YellowbrickValueError:
                self.fail("could not find errors on {}".format(model.name))

def test_regressor_cv(self):
        """
        Ensure only "CV" regressors are allowed
        """

        for model in (SVR, Ridge, Lasso, LassoLars, ElasticNet):
            with self.assertRaises(YellowbrickTypeError):
                alphas = AlphaSelection(model())

        for model in (RidgeCV, LassoCV, LassoLarsCV, ElasticNetCV):
            try:
                alphas = AlphaSelection(model())
            except YellowbrickTypeError:
                self.fail("could not instantiate RegressorCV on alpha selection")

def test_get_alphas_param(self):
        """
        Assert that we can get the alphas from ridge, lasso, and elasticnet
        """
        alphas = np.logspace(-10, -2, 100)

        # Test original CV models
        for model in (RidgeCV, LassoCV, ElasticNetCV):
            try:
                model = AlphaSelection(model(alphas=alphas))
                malphas = model._find_alphas_param()
                self.assertTrue(np.array_equal(alphas, malphas))
            except YellowbrickValueError:
                self.fail("could not find alphas on {}".format(model.name))

def predict(self, X):
        binary  = X > 0
        if self.normalize == True:
            X = self.norm.fit_transform(X)

        num_users, num_movies = X.shape
        clf = ElasticNetCV(alphas = [0.1]) 
        predicted = X.copy()


        for user in range(num_users):
            #bool array for movies rated by user
            movie_user = binary[user]       
            #which users to consider as attributes for regression, in this case all except current user
            neighbors = np.ones((num_users), dtype = bool)
            neighbors[user] = False
            X_train_user = X[neighbors]
            X_train_user = X_train_user[:, movie_user].T
            y_train_user = X[user, movie_user]
            clf.fit(X_train_user, y_train_user)
            X_test_user = X[neighbors]
            X_test_user = X_test_user[:, ~movie_user].T
            predicted[user, ~movie_user] = clf.predict(X_test_user) 

        if self.normalize == True:
            predicted = self.norm.inverse_transform(predicted) 

        return predicted

def predict(self, demand_fixture_data, params=None, summed=True):
        ''' Predicts across index using fitted model params

        Parameters
        ----------
        demand_fixture_data : pandas.DataFrame
            Formatted input data as returned by
            :code:`ModelDataFormatter.create_demand_fixture()`
        params : dict, default None
            Parameters found during model fit. If None, `.fit()` must be called
            before this method can be used.

              - :code:`X_design_matrix`: patsy design matrix used in
                formatting design matrix.
              - :code:`formula`: patsy formula used in creating design matrix.
              - :code:`coefficients`: ElasticNetCV coefficients.
              - :code:`intercept`: ElasticNetCV intercept.

        Returns
        -------
        output : pandas.DataFrame
            Dataframe of energy values as given by the fitted model across the
            index given in :code:`demand_fixture_data`.
        '''
        if params is None:
            params = self.params

        design_info = params["X_design_info"]

        model_data = self._model_data_from_demand_fixture_data(
            demand_fixture_data)

        (X,) = patsy.build_design_matrices([design_info],
                                           model_data,
                                           return_type='dataframe')

        model_obj = linear_model.ElasticNetCV(l1_ratio=self.l1_ratio,
                                              fit_intercept=False)

        model_obj.coef_ = np.array(params["coefficients"])
        model_obj.intercept_ = params["intercept"]

        try:
            predicted = pd.Series(model_obj.predict(X), index=X.index)
        except:
            return np.nan, np.nan

        if summed:
            n = len(predicted)
            predicted = np.sum(predicted)
            stddev = self.error_fun(n)
            variance = stddev ** 2
            # Convert to 95% confidence limits
        else:
            # add NaNs back in
            predicted = predicted.reindex(model_data.index)
            variance = self.variance

        return predicted, variance