java类org.neo4j.graphdb.factory.GraphDatabaseFactory的实例源码

public static void main(String []args) {
        dbFact = new GraphDatabaseFactory();
        db= dbFact.newEmbeddedDatabase("gestionAvionsBD2");
        /*AjouterDepart ad = new AjouterDepart();
        ad.setLocationRelativeTo(null);
        ad.loadTableBD();
        ad.setVisible(true);*/

        MainWindow mainFen = new MainWindow();
        mainFen.setLocationRelativeTo(null);
        mainFen.setVisible(true);
            /*Node jNode = db.createNode(Tutorials.JAVAtest);
            Node jNode2 = db.createNode(Tutorials.Test2);
            jNode.setProperty("Id", "5");
            jNode2.setProperty("Id2", "10");11
            Relationship relat = jNode.createRelationshipTo(jNode2, Relations.Relation);
            relat.setProperty("Id", "15");
            tx.success();*/
}

@Test
public void insert_node_should_succeed_with_populated_index() throws Exception {
    Neo4jBatchInserterNode nodeInserter = getNeo4jBatchInserterNode(false);

    // populate the db
    List<String> columns = DummyTalendPojo.getColumnList();
    for (int i = 0; i < 100; i++) {
        DummyTalendPojo pojo = DummyTalendPojo.getDummyTalendPojo();
        nodeInserter.create(pojo, columns);
    }
    nodeInserter.finish();

    // check if index size
    Assert.assertEquals(100, batchDb.batchInserterIndexes.get(INDEX_NAME).query("*:*").size());

    // check the database data
    batchDb.shutdown();
    // Testing it with real graphdb
    GraphDatabaseService graphDb = new GraphDatabaseFactory().newEmbeddedDatabase(dbPath);
    try (Transaction tx = graphDb.beginTx()) {
        String result = graphDb.execute("MATCH (n:" + LABEL_NAME + ") RETURN count(n) AS count").resultAsString();
        Assert.assertEquals("+-------+\n| count |\n+-------+\n| 100   |\n+-------+\n1 row\n", result);
    }
    graphDb.shutdown();
}

@Test
public void update_node_should_succeed() throws Exception {
    // populate the db
    Neo4jBatchInserterNode nodeInserter = getNeo4jBatchInserterNode(false);
    List<String> columns = DummyTalendPojo.getColumnList();
    DummyTalendPojo pojo = DummyTalendPojo.getDummyTalendPojo();
    nodeInserter.create(pojo, columns);
    nodeInserter.finish();

    // By indexing the import id, I update the last node
    pojo.propString = "A new String";
    nodeInserter = getNeo4jBatchInserterNode(true);
    nodeInserter.create(pojo, columns);
    nodeInserter.finish();

    // check the result into the database
    batchDb.shutdown();
    GraphDatabaseService graphDb = new GraphDatabaseFactory().newEmbeddedDatabase(dbPath);
    try (Transaction tx = graphDb.beginTx()) {
        String result = graphDb.execute("MATCH (n:" + LABEL_NAME + ") WHERE exists(n.id) RETURN n.propString AS string").resultAsString();
        Assert.assertEquals("+----------------+\n| string         |\n+----------------+\n| \"A new String\" |\n+----------------+\n1 row\n", result);
    }
    graphDb.shutdown();
}

@Test
public void create_node_uniqueness_constraint_should_work() {
    // Test const.
    String label = "Test";
    String property = "myProp";

    // crete the schema
    batchDb.createSchema("NODE_PROPERTY_UNIQUE", label, property);
    batchDb.shutdown();

    // Testing it with real graphdb
    GraphDatabaseService graphDb = new GraphDatabaseFactory().newEmbeddedDatabase(dbPath);
    try (Transaction tx = graphDb.beginTx()) {
        Assert.assertTrue(graphDb.schema().getConstraints(DynamicLabel.label(label)).iterator().hasNext());
    }
    graphDb.shutdown();
}

@Test
public void create_node_index_should_work() {
    // Test const.
    String label = "Test";
    String property = "myProp";

    // crete the schema
    batchDb.createSchema("NODE_PROPERTY_INDEX", label, property);
    batchDb.shutdown();

    // Testing it with real graphdb
    GraphDatabaseService graphDb = new GraphDatabaseFactory().newEmbeddedDatabase(dbPath);
    try (Transaction tx = graphDb.beginTx()) {
        Assert.assertTrue(graphDb.schema().getIndexes(DynamicLabel.label(label)).iterator().hasNext());
    }
    graphDb.shutdown();

}

@Test
    public void shouldTransformCypherAlbumsToJSONDoc() throws SQLException {

//      GraphDatabaseService database = new TestGraphDatabaseFactory().newImpermanentDatabase();
        GraphDatabaseService database = new GraphDatabaseFactory().newEmbeddedDatabase(new File("/Applications/Development/Neo4j-2.3.2/neo4j-community-2.3.2/data/graph.db"));

        database.registerTransactionEventHandler(new Neo4jEventListener(database));

        String cypher = "MATCH (n) "
                        + "WHERE n.name = \"Volcano\" "
                        + "WITH n "
                        + "SET n.explicit = true "
                        + "RETURN n";

        try (Transaction tx = database.beginTx()) {

            database.execute(cypher);
            tx.success();
        }
    }

@SuppressWarnings("deprecation")
public KnowledgeGraph(String db_path) {

    this.db_path = new String(db_path);

    // delete data from previous runs
    try {
        FileUtils.deleteRecursively(new File(this.db_path));
    } catch (IOException e) {
        e.printStackTrace();
    }

    // create a neo4j database
    this.graphDb = new GraphDatabaseFactory().newEmbeddedDatabase(this.db_path);

    registerShutdownHook(graphDb);
}

@Test
public void testRelReader() throws IOException{

  RelReader reader = new RelReader(neo4jLocation);
  reader.batchBuildGraph(new File("my_test_umls/"), "CtakesAllTuis.txt", "SNOMEDCT_US");
  GraphDatabaseService db = new GraphDatabaseFactory().newEmbeddedDatabase(new File(neo4jLocation));

  try ( Transaction tx = db.beginTx() ){
    TraversalDescription td = db.traversalDescription()
        .breadthFirst()
        .relationships(RelReader.RelTypes.ISA, Direction.INCOMING)
        .evaluator(Evaluators.excludeStartPosition());

    Node cuiNode = db.findNode(RelReader.DictLabels.Concept, RelReader.CUI_PROPERTY, "C0007102");
    Assert.assertNotNull(cuiNode);
    Traverser traverser = td.traverse(cuiNode);
    for(Path path : traverser){
      System.out.println("At depth " + path.length() + " => " + path.endNode().getProperty("cui"));
    }
  }
  db.shutdown();
}

public GraphDatabaseService connect() {
    if (null == graph) {
        graph = new GraphDatabaseFactory().newEmbeddedDatabase(path);
        try (Transaction tx = graph.beginTx()) {
            graph.schema().indexFor(LABEL).on(ID).create();
            tx.success();
        }
        Runtime.getRuntime().addShutdownHook(new Thread() {
            @Override
            public void run() {
                graph.shutdown();
            }
        });
    }
    return graph;
}

private void createDb() {
    graphDb = new GraphDatabaseFactory().newEmbeddedDatabase(DB_PATH);
    registerShutdownHook(graphDb);

    try (Transaction tx = graphDb.beginTx()) {
        // Database operations go here

        firstNode = graphDb.createNode();
        firstNode.setProperty("message", "Hello, ");
        secondNode = graphDb.createNode();
        secondNode.setProperty("message", "World!");

        relationship = firstNode.createRelationshipTo(secondNode, RelTypes.KNOWS);
        relationship.setProperty("message", "brave Neo4j ");

        System.out.print(firstNode.getProperty("message"));
        System.out.print(relationship.getProperty("message"));
        System.out.print(secondNode.getProperty("message"));

        greeting = ((String) firstNode.getProperty("message")) + ((String) relationship.getProperty("message"))
                + ((String) secondNode.getProperty("message"));

        tx.success();
    }
}

@Override
protected GraphTransactionalImpl createInstance() throws Exception {
  GraphDatabaseService graphDb = new GraphDatabaseFactory().newEmbeddedDatabase(new File(path));
  Neo4jConfiguration config = new Neo4jConfiguration();
  config.getExactNodeProperties().addAll(newHashSet(
    NodeProperties.LABEL,
    Concept.SYNONYM,
    Concept.ABREVIATION,
    Concept.ACRONYM));
  config.getIndexedNodeProperties().addAll(newHashSet(
      NodeProperties.LABEL,
      Concept.CATEGORY, Concept.SYNONYM,
      Concept.ABREVIATION,
      Concept.ACRONYM));
  Neo4jModule.setupAutoIndexing(graphDb, config);
  IdMap idMap = new IdMap();
  RelationshipMap relationahipMap = new RelationshipMap();
  return new GraphTransactionalImpl(graphDb, idMap, relationahipMap);
}

@Test
public void test() throws Exception {
  OwlLoadConfiguration config = new OwlLoadConfiguration();
  Neo4jConfiguration neo4jConfig = new Neo4jConfiguration();
  neo4jConfig.setLocation(folder.getRoot().getAbsolutePath());
  config.setGraphConfiguration(neo4jConfig);
  OntologySetup ontSetup = new OntologySetup();
  ontSetup.setUrl("http://127.0.0.1:10000/main.owl");
  config.getOntologies().add(ontSetup);
  BatchOwlLoader.load(config);

  GraphDatabaseService graphDb = new GraphDatabaseFactory().newEmbeddedDatabase(folder.getRoot());
  graphDb.beginTx();
  GraphvizWriter writer = new GraphvizWriter();
  Walker walker = Walker.fullGraph(graphDb);
  writer.emit(new File("/tmp/test.dot"), walker);
}

private WikiNerGraphConnector(String dbDir) {
    graphDb = new GraphDatabaseFactory().newEmbeddedDatabase(dbDir);
    IndexDefinition indexDefinition;
    Schema schema;
    Transaction tx = graphDb.beginTx(); 

    schema = graphDb.schema();
    IndexManager index = graphDb.index();
    entities = index.forNodes(entityLabel.name());
    cities = index.forNodes(cityLabel.name());
    try{
         indexDefinition = schema.indexFor( entityLabel ).on( "nameType" ).create();
    }catch(Exception e){

    }

    tx.success();
    tx.close();
}

private void DBInit()
{
    graph_db = new GraphDatabaseFactory()
        .newEmbeddedDatabaseBuilder(db_name)
        .setConfig(GraphDatabaseSettings.keep_logical_logs, "false")
        .setConfig(GraphDatabaseSettings.use_memory_mapped_buffers, "true")
        .setConfig(ShellSettings.remote_shell_enabled, "true")
        .setConfig(ShellSettings.remote_shell_port, "1337")
        .setConfig(ShellSettings.remote_shell_read_only, "true")
        .newGraphDatabase();

    if(bootstrap)
        DoBootstrap();

    transaction = new NinjaTransaction(graph_db, Neo4jGraph.COUNT_THRESHOLD);
}

@SuppressWarnings("unchecked")
private Block dbFactory(final Path dbdir, final String dbkey) {
  return unit -> {
    GraphDatabaseService dbservice = unit.registerMock(GraphDatabaseService.class);
    // unit.mockStatic(RuntimeRegistry.class);
    // expect(RuntimeRegistry.getStartedRuntime(dbservice)).andReturn(null);

    LinkedBindingBuilder<GraphDatabaseService> lbb = unit.mock(LinkedBindingBuilder.class);
    lbb.toInstance(dbservice);

    Binder binder = unit.get(Binder.class);
    expect(binder.bind(Key.get(GraphDatabaseService.class))).andReturn(lbb);

    ServiceKey keys = unit.get(ServiceKey.class);
    keys.generate(eq(GraphDatabaseService.class), eq(dbkey), unit.capture(Consumer.class));

    GraphDatabaseBuilder dbbuilder = unit.registerMock(GraphDatabaseBuilder.class);
    expect(dbbuilder.newGraphDatabase()).andReturn(dbservice);

    GraphDatabaseFactory factory = unit.constructor(GraphDatabaseFactory.class)
        .build();
    expect(factory.setUserLogProvider(isA(Slf4jLogProvider.class))).andReturn(factory);
    expect(factory.newEmbeddedDatabaseBuilder(dbdir.toFile())).andReturn(dbbuilder);
  };
}

/**
 * Creates a new embedded db in the neoRepository folder.
 *
 * @param eraseExisting if true deletes previously existing db
 */
public GraphDatabaseBuilder newEmbeddedDb(File storeDir, boolean eraseExisting) {
  if (eraseExisting && storeDir.exists()) {
    // erase previous db
    LOG.debug("Removing previous neo4j database from {}", storeDir.getAbsolutePath());
    FileUtils.deleteQuietly(storeDir);
  }
  GraphDatabaseBuilder builder = new GraphDatabaseFactory()
      .setUserLogProvider(new Slf4jLogProvider())
      .newEmbeddedDatabaseBuilder(storeDir)
      .setConfig(GraphDatabaseSettings.keep_logical_logs, "false")
      .setConfig(GraphDatabaseSettings.pagecache_memory, mappedMemory + "m");
  if (shell) {
    LOG.info("Enable neo4j shell on port " + port);
    builder.setConfig(ShellSettings.remote_shell_enabled, "true")
        .setConfig(ShellSettings.remote_shell_port, String.valueOf(port))
        // listen to all IPs, not localhost only
        .setConfig(ShellSettings.remote_shell_host, "0.0.0.0");
  }
  return builder;
}

@Override
public EmbeddedNeo4jDatastore createGraphDatabaseService(URI uri, Properties properties) throws MalformedURLException {
    String path;
    try {
        path = URLDecoder.decode(uri.toURL().getPath(), "UTF-8");
    } catch (UnsupportedEncodingException e) {
        throw new MalformedURLException(e.getMessage());
    }
    GraphDatabaseBuilder databaseBuilder = new GraphDatabaseFactory().newEmbeddedDatabaseBuilder(new File(path));
    Properties neo4jProperties = Neo4jPropertyHelper.getNeo4jProperties(properties);
    for (String name : neo4jProperties.stringPropertyNames()) {
        databaseBuilder.setConfig(name, neo4jProperties.getProperty(name));
    }
    GraphDatabaseService graphDatabaseService = databaseBuilder.newGraphDatabase();
    return new EmbeddedNeo4jDatastore(graphDatabaseService);
}

public Neo4jManager(String dbFolder, boolean createServices, boolean readOnly, Map<String, String> config) {

    if (createServices) {
        if(!readOnly){
            if(config != null){                                     
                graphService = new GraphDatabaseFactory().newEmbeddedDatabaseBuilder(dbFolder).setConfig(config).newGraphDatabase();
            }else{
                graphService = new GraphDatabaseFactory().newEmbeddedDatabaseBuilder(dbFolder).newGraphDatabase();
            }

        }else{

            if(config != null){
                config.put( "read_only", "true" );
                graphService = new GraphDatabaseFactory().newEmbeddedDatabaseBuilder(dbFolder).setConfig(config).newGraphDatabase();
            }else{
                config = new HashMap<>();
                config.put( "read_only", "true" );
                graphService = new GraphDatabaseFactory().newEmbeddedDatabaseBuilder(dbFolder).setConfig(config).newGraphDatabase();
            }                
        }            
    }        
}

@Override
public void open()
{
    neo4jGraph = new GraphDatabaseFactory().newEmbeddedDatabase(dbStorageDirectory.getAbsolutePath());
    try (final Transaction tx = beginUnforcedTransaction())
    {
        try
        {
            neo4jGraph.schema().awaitIndexesOnline(10l, TimeUnit.MINUTES);
            tx.success();
        }
        catch (Exception e)
        {
            tx.failure();
            throw new BenchmarkingException("unknown error", e);
        }
    }
}

@Override
public void createGraphForSingleLoad()
{
    neo4jGraph = new GraphDatabaseFactory().newEmbeddedDatabase(dbStorageDirectory.getAbsolutePath());
    try (final Transaction tx = beginUnforcedTransaction())
    {
        try
        {
            schema = neo4jGraph.schema();
            schema.indexFor(NODE_LABEL).on(NODE_ID).create();
            schema.indexFor(NODE_LABEL).on(COMMUNITY).create();
            schema.indexFor(NODE_LABEL).on(NODE_COMMUNITY).create();
            tx.success();
        }
        catch (Exception e)
        {
            tx.failure();
            throw new BenchmarkingException("unknown error", e);
        }
    }
}

/**
 * Clears all data in the DB and reconnects to it afterwards.
 */
public void ClearDatabase(){
    // Shutdown database before erasing it
    log.debug("Shutting down the database");
    mGraphDb.shutdown();
    try
       {
        log.debug("Erasing the database files");
           FileUtils.deleteRecursively( new File( mDbPath ) );
       }
       catch ( IOException e )
       {
           throw new RuntimeException( e );
       }
    // Restart database
    log.debug("Reconnecting to database");
    mGraphDb = new GraphDatabaseFactory().
            newEmbeddedDatabaseBuilder(mDbPath).
            setConfig( GraphDatabaseSettings.node_keys_indexable, KEY_HASH ).
            setConfig( GraphDatabaseSettings.node_auto_indexing, "true" ).
            newGraphDatabase();
    registerShutdownHook(mGraphDb);
}

@Bean(destroyMethod = "shutdown")
public GraphDatabaseService graphDatabaseService() {
    if(Arrays.asList(environment.getActiveProfiles()).contains("cloud")) {
        // Connect to external Neo4j server
        setGraphDatabaseService(new SpringCypherRestGraphDatabase(url, username, password));
    } else {
        // Connect to local ephemeral database
        return new GraphDatabaseFactory().newEmbeddedDatabase("user3.db");
    }

    return getGraphDatabaseService();
}

@Bean(destroyMethod = "shutdown")
public GraphDatabaseService graphDatabaseService() {
    if(Arrays.asList(environment.getActiveProfiles()).contains("cloud")) {
        // Connect to external Neo4j server
        setGraphDatabaseService(new SpringCypherRestGraphDatabase(url, username, password));
    } else {
        // Connect to local ephemeral database
        return new GraphDatabaseFactory().newEmbeddedDatabase("user2.db");
    }

    return getGraphDatabaseService();
}

public static void main(String[] args) {

        CommandLineParser parser = new DefaultParser();
        CommandLine cmd = Utils.parseCommandLine(getOptions(), args);

        String graphDbPath = cmd.getOptionValue("d", Owl2Neo4jLoader.GRAPH_DB_PATH);
        GraphDatabaseService graphDb = new GraphDatabaseFactory().newEmbeddedDatabase(new File(graphDbPath));
        String query = "MATCH (n) RETURN n ORDER BY ID(n) DESC LIMIT 30;";
        Transaction tx = graphDb.beginTx();
        try {
            Result result = graphDb.execute(query);
            while (result.hasNext()) {
                Map<String, Object> row = result.next();
                for (String key : result.columns()) {
                    Node node = (Node) row.get(key);
                    Object name = node.getProperty("name");
                    System.out.printf("%s = %s; name = %s%n", key, row.get(key), name);
                }

            }
            tx.success();
        }
        catch (Exception e) {
            System.err.println("Exception caught: " + e.getMessage());
            e.printStackTrace();
            System.exit(ERR_STATUS);
        }
        finally {
            tx.close();
        }
        System.out.println("Exiting with success...");
        System.exit(OK_STATUS);

    }

@Before
public void setUp() throws Exception {
    graphDb = new GraphDatabaseFactory().newEmbeddedDatabase(new File(TEST_GRAPH_DB_PATH));
    OWLOntologyManager manager = OWLManager.createOWLOntologyManager();
    OWLOntology ontology = manager.loadOntologyFromOntologyDocument(file.getFile());
    OWLDataFactory factory = manager.getOWLDataFactory();
    loader = new Owl2Neo4jLoader(graphDb, ontology, factory);
}

@Test
public void execute_import_should_succeed() throws IOException {
    this.importTool.execute();

    // Testing it with real graphdb
    GraphDatabaseService graphDb = new GraphDatabaseFactory().newEmbeddedDatabase(dbPath);
    try (Transaction tx = graphDb.beginTx()) {
        String result = graphDb.execute("MATCH ()-[r]->() RETURN count(r) AS count").resultAsString();
        Assert.assertEquals("+-------+\n| count |\n+-------+\n| 9     |\n+-------+\n1 row\n", result);
    }
    graphDb.shutdown();

}

@Test
public void insert_edge_should_succeed() throws Exception {
    Neo4jBatchInserterNode nodeInserter = getNeo4jBatchInserterNode(false);

    // populate the db with nodes
    List<String> columns = DummyTalendPojo.getColumnList();
    for (int i = 0; i < 100; i++) {
        DummyTalendPojo pojo = DummyTalendPojo.getDummyTalendPojo(i);
        nodeInserter.create(pojo, columns);
    }
    nodeInserter.finish();

    // create relationship
    Neo4jBatchInserterRelationship batchInserterRelationship = getNeo4jBatchInserterRelationship(true);
    for (int i = 0; i < 100; i++) {
        batchInserterRelationship.create(DummyTalendPojo.getDummyTalendPojo(i), DummyTalendPojo.getColumnList());
    }
    batchInserterRelationship.finish();

    // check the database data
    batchDb.shutdown();

    // Testing it with real graphdb
    GraphDatabaseService graphDb = new GraphDatabaseFactory().newEmbeddedDatabase(dbPath);
    try (Transaction tx = graphDb.beginTx()) {
        String result = graphDb.execute("MATCH ()-[r:" + REL_TYPE + "]->() RETURN count(r) AS count").resultAsString();
        Assert.assertEquals("+-------+\n| count |\n+-------+\n| 100   |\n+-------+\n1 row\n", result);
    }
    graphDb.shutdown();
}

private void run(){
    GraphDatabaseService graph=new GraphDatabaseFactory().newEmbeddedDatabase( new File(config.getGraphPath()) );
    for (int i=0;i<extractors.size();i++) {
        System.out.println(extractors.get(i).getClass().getName()+" started.");
        extractors.get(i).run(graph);
        extractors.set(i, new DefaultExtractor());
        System.gc();
    }
}

private boolean initDB() {
    File db = new File(this.networkFileName);
    graphDb = new GraphDatabaseFactory().newEmbeddedDatabase(db);

    Runtime.getRuntime().addShutdownHook(new Thread() {
        @Override
        public void run() {
            shutdown();
        }
    });
    //graphDb.beginTx();
    return true;
}

public GraphDatabaseService connect() {
    if (null == graph) {
        graph = new GraphDatabaseFactory().newEmbeddedDatabase(path);
        Runtime.getRuntime().addShutdownHook(new Thread() {
            @Override
            public void run() {
                graph.shutdown();
            }
        });
    }
    return graph;
}