DbCore.py 文件源码

def getVSeq(self):
        # _seq_vdj = self.getField('SEQUENCE_VDJ')
        _seq_vdj = self.getField('SEQUENCE_IMGT')
        # _idx_v = int(self.getField('V_SEQ_LENGTH'))
        return _seq_vdj[:312]  # 312: V length without cdr3

    # Get a field value converted to a Seq object by column name
    #
    # Arguments:  field = column name
    # Returns:    value in the field as a Seq object