plotScoreHists.py 文件源码

def scoreHists(scoresFN,outFN,numBins,geneNames,scoreType):
    '''Read through a scores file, and separate into all pairwise comparisons. Then plot hist of each.'''

    # currently, this seems to require a display for interactive
    # plots. would be nice to make it run without that...

    pairD = readScorePairs(scoresFN,geneNames,scoreType)

    pyplot.ioff() # turn off interactive mode
    with PdfPages(outFN) as pdf:
        for key in pairD:
            fig = pyplot.figure()
            pyplot.hist(pairD[key],bins=numBins)
            pyplot.title('-'.join(key))
            pdf.savefig()
            pyplot.close()