searchlight.py 文件源码

python
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项目:brainiak 作者: brainiak 项目源码 文件源码
def __init__(self, sl_rad=1, max_blk_edge=10, shape=Cube,
                 min_active_voxels_proportion=0):
        """Constructor

        Parameters
        ----------

        sl_rad: radius, in voxels, of the sphere inscribed in the
                   searchlight cube, not counting the center voxel

        max_blk_edge: max edge length, in voxels, of the 3D block

        shape: brainiak.searchlight.searchlight.Shape indicating the
        shape in voxels of the searchlight region

        min_active_voxels_proportion: float
            If a searchlight region does not have more than this minimum
            proportion of active voxels in the mask, it is not processed by the
            searchlight function. The mask used for the test is the
            intersection of the global (brain) mask and the `Shape` mask. The
            seed (central) voxel of the searchlight region is taken into
            consideration.
        """
        self.sl_rad = sl_rad
        self.max_blk_edge = max_blk_edge
        self.min_active_voxels_proportion = min_active_voxels_proportion
        self.comm = MPI.COMM_WORLD
        self.shape = shape(sl_rad).mask_
        self.bcast_var = None
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