test_hgvs_grammar_full.py 文件源码

def test_parser_test_completeness(self):
        """ensure that all rules in grammar have tests"""

        grammar_rule_re = re.compile("^(\w+)")
        grammar_fn = pkg_resources.resource_filename(__name__, "../hgvs/_data/hgvs.pymeta")
        with open(grammar_fn, "r") as f:
            grammar_rules = set(r.group(1) for r in filter(None, map(grammar_rule_re.match, f)))

        with open(self._test_fn, "r") as f:
            reader = csv.DictReader(f, delimiter=str("\t"))
            test_rules = set(row["Func"] for row in reader)

        untested_rules = grammar_rules - test_rules

        self.assertTrue(len(untested_rules) == 0, "untested rules: {}".format(untested_rules))