parsers.py 文件源码

def sbol_to_list(self):
        """
        Take an sbol file and return a linear list of components
        """
        # Read in SBOL file
        # Look for component def with components
        # Build a list of SBOL componetns from this
        # If multiple do something fancy?
        elements = []
        self.document.read(self.file_data)
        for c in self.document.list_components():
            if len(c.components) > 0:
                comp_elems = []
                for cl in self.document.get_components(c.identity):
                    role_uri = cl.definition.roles[0]
                    comp_elems.append({'name': cl.display_id,
                                       'role': self.INVERT_ROLES[role_uri].replace(' ', '-')})
                elements.append(comp_elems)
        return elements