fasta.py 文件源码

def fasta_files_equal(seq_file1, seq_file2):
    """Check equality of a FASTA file to another FASTA file

    Args:
        seq_file1: Path to a FASTA file
        seq_file2: Path to another FASTA file

    Returns:
        bool: If the sequences are the same

    """

    # Load already set representative sequence
    seq1 = SeqIO.read(open(seq_file1), 'fasta')

    # Load kegg sequence
    seq2 = SeqIO.read(open(seq_file2), 'fasta')

    # Test equality
    if str(seq1.seq) == str(seq2.seq):
        return True
    else:
        return False