uniprot.py 文件源码

def features(self):
        """list: Get the features from the feature file, metadata file, or in memory"""
        if self.feature_file:
            log.debug('{}: reading features from feature file {}'.format(self.id, self.feature_path))
            with open(self.feature_path) as handle:
                feats = list(GFF.parse(handle))
                if len(feats) > 1:
                    log.warning('Too many sequences in GFF')
                else:
                    return feats[0].features

        elif self.metadata_file:
            log.debug('{}: reading features from metadata file {}'.format(self.id, self.metadata_path))
            tmp_sr = SeqIO.read(self.metadata_path, 'uniprot-xml')
            return tmp_sr.features

        else:
            return self._features