fdb.py 文件源码

def FastaToFDB(self, fastafile, username):
        fdb_registers = []
        content = open(fastafile, "r")

        sequences = parse(content, 'fasta')

        for sequence in sequences:
            fdb_register = FDBRegister()
            fdb_register.description = sequence.description
            fdb_register.gene = str(sequence.seq)
            fdb_register.geneinfo = sequence.annotations
            fdb_register.filename = fastafile
            fdb_register.date = date.today()
            fdb_register.user = username

            fdb_registers.append(fdb_register)

        content.close()

        return self.mount_fdb_file(fdb_registers)