dls_funct.py 文件源码

def tSNE_pairwise(D):
    """
    From clustering_on_transcript_compatibility_counts, see github for MIT license
    """
    tsne = manifold.TSNE(n_components=2, random_state=0, metric='precomputed', n_iter=2000, verbose=1);
    X_tsne = tsne.fit_transform(D);
    return X_tsne

# Plot function with Zeisel's colors corresponding to labels