tests.py 文件源码

def test_disambiguate_ensembl_entrez_ids(self):
        # some random test reported by users
        res = self.json_ok(self.get_ok(self.api + "/query?q=ensembl.transcript:ENSMUST00000161459"))
        eq_(len(res["hits"]),1)
        eq_(res["hits"][0]["symbol"],"Setdb2")
        res = self.json_ok(self.get_ok(self.api + "/gene/ENSG00000011454"))
        eq_(type(res),dict)
        eq_(res["entrezgene"],23637)
        res = self.json_ok(self.get_ok(self.api + "/gene/ENSG00000237613"))
        eq_(type(res),dict)
        eq_(res["entrezgene"],645520)
        ### test "orphan" EntrezID (associated EnsemblIDs were all resolved into other EntrezIDs but we want to keep ambiguated
        ### Ensembl data for those)
        ###res = self.json_ok(self.get_ok(self.api + "/gene/100287596"))
        ###ensids = [e["gene"] for e in res["ensembl"]]
        ###eq_(set(endids),{"ENSG00000248472","ENSG00000223972"})