tests.py 文件源码

def test_query_ensembl(self):
        u = "/query?q=ensemblprotein:ENSP00000379391&fields=ensembl"
        prot = self.json_ok(self.get_ok(self.api + u))
        u = "/query?q=ensembltranscript:ENST00000396082&fields=ensembl"
        rna = self.json_ok(self.get_ok(self.api + u))
        u = "/query?q=ensemblgene:ENSG00000100373&fields=ensembl"
        gene = self.json_ok(self.get_ok(self.api + u))
        # don' compare score, useless
        [d["hits"][0].pop("_score") for d in [prot, rna, gene]]
        eq_(prot["hits"], rna["hits"])
        eq_(rna["hits"], gene["hits"])
        eq_(rna["total"], 1)
        hit = rna["hits"][0]
        eq_(hit["ensembl"]["gene"], "ENSG00000100373")
        assert "ENSP00000216211" in hit["ensembl"]["protein"]
        assert "ENST00000216211" in hit["ensembl"]["transcript"]
        # POST /gene batch
        resl = self.json_ok(self.post_ok(self.api + '/gene', {'ids': 'ENSG00000148795'}))
        eq_(len(resl), 1)
        res = resl[0]
        eq_(res["_id"], "1586")