Collection.py 文件源码

def run(self):
        logging.info("Grabbing Filling Metrics")
        self.metricsCollector()
        logging.info("Loading Reference")
        self.loadReference()
        logging.info("Removing Poorly Supported Edges")
        self.cleanGraph()
        logging.info("Outputting new contigs")
        self.outputContigs()
        logging.info("Finished!")
        #g = nx.Graph()
        #for i in self.subGraphs:
            #for n in i.nodes():
                #g.add_node(n)
            #for e in i.edges():
                #g.add_edge(*e)
        #nx.write_gml(g,"output.gml")