pipeline_parse.py 文件源码

def parse_XML(self, xmlfile, params, skip_validation=False, queue=None,
                  submit_jobs=True, completion_mail=True, search_path="",
                  user_override_file=None, keep_temp=False, release_jobs=True,
                  force_conditional_steps=False, delay=None, email_address=None,
                  error_email_address=None, walltime_multiplier=1,
                  write_pipeline_files=False,
                  tool_exec_mode=ToolExecModes.BATCH_STANDARD):

        try:
            self._parse_XML(xmlfile, params, skip_validation, queue, submit_jobs,
                            completion_mail, search_path, user_override_file,
                            keep_temp, release_jobs, force_conditional_steps,
                            delay, email_address, error_email_address,
                            walltime_multiplier, write_pipeline_files,
                            tool_exec_mode)
        except civet_exceptions.ParseError as e:
            print("\nError parsing XML:  {}".format(e), file=sys.stderr)
            sys.exit(1)
        except civet_exceptions.MissingFile as e:
            print(e, file=sys.stderr)
            sys.exit(1)