queue_substances.py 文件源码

python
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项目:DeepSEA 作者: momeara 项目源码 文件源码
def smiles_triple_batch_queue(eval_params):
    fname_queue = tf.train.string_input_producer(
        [eval_params['substances_fname']],
        num_epochs=None,
        shuffle=True,
        name="substances_fname_queue")

    reader = tf.TextLineReader(
        skip_header_lines=1,
        name="substance_file_reader")
    _, record = reader.read(queue=fname_queue)
    # entries = [
    #   target_id,
    #   substance_id, smiles,
    #   substance_plus_id, smiles_plus
    #   substance_minus_id, smiles_minus]
    entries = tf.decode_csv(
        records=record,
        record_defaults=[[""], [""], [""], [""], [""], [""], [""]],
        field_delim=eval_params['substances_field_delim'])
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