jstreecontrol.py 文件源码

def _get_hd_args(path, high_dim_node, annotation):
    """
    Create dict with meta tags that belong to a certain high dimensional node.
    """
    map_file = high_dim_node.sample_mapping

    s = map_file.slice_path(path).iloc[:, 5].unique()
    t = map_file.slice_path(path).iloc[:, 6].unique()

    hd_args = {'hd_sample': ', '.join(s.astype(str)) if pd.notnull(s[0]) else '',
               'hd_tissue': ', '.join(t.astype(str)) if pd.notnull(t[0]) else '',
               'hd_type': Mappings.annotation_data_types.get(high_dim_node.params.datatype),
               }

    if annotation:
        hd_args.update({'pl_marker_type': annotation.marker_type,
                        'pl_genome_build': annotation.params.get('GENOME_RELEASE', ''),
                        'pl_title': annotation.params.get('TITLE', ''),
                        'pl_id': annotation.platform})
    return hd_args