__init__.py 文件源码

def join(args, outs, chunk_args, chunk_outs):
    chunk = chunk_outs[0]

    # if --output-dir and --interop-dir not overridden, move
    # into standard output location
    if not args.output_path:
        shutil.move(chunk.fastq_path, outs.fastq_path)
    else:
        outs.fastq_path = args.output_path

    if not args.interop_output_path:
        shutil.move(chunk.interop_path, outs.interop_path)
    else:
        outs.interop_path = args.interop_output_path

    outs.rc_i2_read = chunk.rc_i2_read
    outs.file_read_types_map = chunk.file_read_types_map
    outs.bcl2fastq_version = chunk.bcl2fastq_version
    outs.bcl2fastq_args = chunk.bcl2fastq_args