def run(self):
tstart = datetime.now()
msg = "{} Starting validator: {}".format(tstart, self.vcf_file)
self.log(msg)
std = self.validate()
tend = datetime.now()
annotation_time = tend - tstart
msg = "{} Finished validator, it took: {}".format(tend, annotation_time)
self.log(msg)
# print(tend, 'Finished validator, it took: ', annotation_time)
return std
# Validate vcf file with Vcftools
评论列表
文章目录