test_biodownloader.py 文件源码

def setUp(self):
        """Initialize the framework for testing."""

        self.uniprotid = "P00439"
        self.pdbid = "2pah"
        self.cathid = "1.50.10.100_1318"
        self.pfamid = "PF08124"
        self.config = c
        self.tmp = c.db_root
        self.fetch_from_url_or_retry = fetch_from_url_or_retry
        self.fetch_summary_properties_pdbe = fetch_summary_properties_pdbe
        self.get_preferred_assembly_id = get_preferred_assembly_id
        self.download_structure_from_pdbe = download_structure_from_pdbe
        self.download_sifts_from_ebi = download_sifts_from_ebi
        self.download_data_from_uniprot = download_data_from_uniprot
        self.download_alignment_from_cath = download_alignment_from_cath
        self.download_alignment_from_pfam = download_alignment_from_pfam
        self.downloads = downloads
        self.file_downloader = file_downloader

        logging.disable(logging.CRITICAL)