test_basc.py 文件源码

def test_ndarray_to_vol():
    import basc
    import nibabel as nb

    subject_file = home + '/git_repo/PyBASC/sample_data/sub1/Func_Quarter_Res.nii.gz'
    subject_file = home + '/git_repo/PyBASC/sample_data/test.nii.gz'
    data = nb.load(subject_file).get_data().astype('float32')
    roi_mask_file= home + '/git_repo/PyBASC/masks/LC_Quarter_Res.nii.gz'
    print( 'Data Loaded')


    roi_mask_file_nb = nb.load(roi_mask_file)

    roi_mask_nparray = nb.load(roi_mask_file).get_data().astype('float32').astype('bool')
    roi1data = data[roi_mask_nparray]

    data_array=roi1data
    sample_file=subject_file
    filename=home + '/git_repo/PyBASC/sample_data/ndarray_to_vol_test.nii.gz'

    basc.ndarray_to_vol(data_array, roi_mask_file, roi_mask_file, filename)