entrez_qiime.py 文件源码

def get_deleted_nodes():

    deleted = {}

    delnodesdmp = open(args.infile_delnodesdmp_path,'r')

    for curr_line in delnodesdmp:
        curr_line_old_taxid = curr_line.split('|')[0].strip()
        deleted[curr_line_old_taxid] = True

    delnodesdmp.close()

    log_file = open(args.logfile_path, 'a')
    log_file.write('get_deleted_nodes() finished ' + strftime("%H:%M:%S on %d-%m-%Y",localtime()) + '\n')
    log_file.close()

    return(deleted)

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