BedManagerTest.java 文件源码

@Test
@Transactional(propagation = Propagation.REQUIRES_NEW)
public void testRegisterUrl() throws Exception {
    String bedUrl = UrlTestingUtils.TEST_FILE_SERVER_URL + "/genes_sorted.bed";
    String indexUrl = UrlTestingUtils.TEST_FILE_SERVER_URL + "/genes_sorted.bed.tbi";

    Server server = UrlTestingUtils.getFileServer(context);
    try {
        server.start();

        IndexedFileRegistrationRequest request = new IndexedFileRegistrationRequest();
        request.setPath(bedUrl);
        request.setType(BiologicalDataItemResourceType.URL);
        request.setIndexType(BiologicalDataItemResourceType.URL);
        request.setIndexPath(indexUrl);
        request.setReferenceId(referenceId);

        BedFile bedFile = bedManager.registerBed(request);
        Assert.assertNotNull(bedFile);

        bedFile = bedFileManager.loadBedFile(bedFile.getId());
        Assert.assertNotNull(bedFile.getId());
        Assert.assertNotNull(bedFile.getBioDataItemId());
        Assert.assertNotNull(bedFile.getIndex());
        Assert.assertFalse(bedFile.getPath().isEmpty());
        Assert.assertFalse(bedFile.getIndex().getPath().isEmpty());

        testLoadBedRecords(bedFile);
    } finally {
        server.stop();
    }
}